Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L24
         (416 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL583834-11|CAM20552.1|  217|Homo sapiens protein ( amily 22 (or...    30   2.7  
AL583834-10|CAI14469.1|  204|Homo sapiens protein ( amily 22 (or...    30   2.7  
AL583834-9|CAI14468.1|  109|Homo sapiens protein ( amily 22 (org...    30   2.7  
AY167996-1|AAO38810.1|  228|Homo sapiens alpha 2,3-sialyltransfe...    29   8.2  

>AL583834-11|CAM20552.1|  217|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 217

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 239 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 147
           CLRC R      + + +    VP C  PC+G
Sbjct: 148 CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 178


>AL583834-10|CAI14469.1|  204|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 204

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 239 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 147
           CLRC R      + + +    VP C  PC+G
Sbjct: 148 CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 178


>AL583834-9|CAI14468.1|  109|Homo sapiens protein ( amily 22
           (organic anion  ).).
          Length = 109

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 239 CLRCSRAPDRFQSITRSRRRSVPSCATPCFG 147
           CLRC R      + + +    VP C  PC+G
Sbjct: 71  CLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 101


>AY167996-1|AAO38810.1|  228|Homo sapiens alpha
           2,3-sialyltransferase III type C9 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 284 VYLQICQQCSGRLVSCLRCSRAPDRFQSITR--SRRRSVPSCATP 156
           + +++ +  SG L   L C R+P RF+S T   SRR   PS A P
Sbjct: 167 IVVRVHRMASGNLWP-LECPRSPLRFESSTHISSRRPPSPSLACP 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,781,802
Number of Sequences: 237096
Number of extensions: 919476
Number of successful extensions: 2587
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)