Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L22
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 293 4e-80
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 293 4e-80
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 293 4e-80
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 247 3e-66
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 177 3e-45
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 177 3e-45
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 163 8e-41
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 5e-34
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 81 4e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 81 4e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 81 4e-16
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 80 9e-16
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 80 9e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 5e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 7e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 4e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 36 0.015
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.080
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.080
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.11
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.19
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 31 0.57
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.57
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.99
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.99
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 4.0
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 4.0
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 4.0
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 7.0
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 7.0
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 9.2
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 293 bits (719), Expect = 4e-80
Identities = 137/142 (96%), Positives = 139/142 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 GEFEAGISKNGQTREHALLAFT 476
GEFEAGISKNGQTREHALLA T
Sbjct: 121 GEFEAGISKNGQTREHALLAQT 142
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 293 bits (719), Expect = 4e-80
Identities = 137/142 (96%), Positives = 139/142 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 GEFEAGISKNGQTREHALLAFT 476
GEFEAGISKNGQTREHALLA T
Sbjct: 121 GEFEAGISKNGQTREHALLAQT 142
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 293 bits (719), Expect = 4e-80
Identities = 137/142 (96%), Positives = 139/142 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 GEFEAGISKNGQTREHALLAFT 476
GEFEAGISKNGQTREHALLA T
Sbjct: 121 GEFEAGISKNGQTREHALLAQT 142
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 247 bits (605), Expect = 3e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 177 bits (431), Expect = 3e-45
Identities = 80/136 (58%), Positives = 101/136 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 419
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 420 EAGISKNGQTREHALL 467
E G GQT+EHALL
Sbjct: 287 ETGFENGGQTKEHALL 302
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 177 bits (431), Expect = 3e-45
Identities = 80/136 (58%), Positives = 101/136 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 419
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 420 EAGISKNGQTREHALL 467
E G GQT+EHALL
Sbjct: 305 ETGFENGGQTKEHALL 320
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 163 bits (395), Expect = 8e-41
Identities = 72/141 (51%), Positives = 101/141 (71%)
Frame = +3
Query: 54 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 414 EFEAGISKNGQTREHALLAFT 476
EFE G + GQTREH++L T
Sbjct: 224 EFETGFDRGGQTREHSMLVKT 244
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 5e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAER 251
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 81.0 bits (191), Expect = 4e-16
Identities = 52/138 (37%), Positives = 70/138 (50%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 416
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 417 FEAGISKNGQTREHALLA 470
QTREH LLA
Sbjct: 150 MP-------QTREHLLLA 160
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 81.0 bits (191), Expect = 4e-16
Identities = 52/138 (37%), Positives = 70/138 (50%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 416
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 417 FEAGISKNGQTREHALLA 470
QTREH LLA
Sbjct: 151 MP-------QTREHLLLA 161
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 81.0 bits (191), Expect = 4e-16
Identities = 52/138 (37%), Positives = 70/138 (50%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 416
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 417 FEAGISKNGQTREHALLA 470
QTREH LLA
Sbjct: 151 MP-------QTREHLLLA 161
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 79.8 bits (188), Expect = 9e-16
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 416
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 417 FEAGISKNGQTREHALLA 470
E QT+EH +LA
Sbjct: 146 ME-------QTKEHLILA 156
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 79.8 bits (188), Expect = 9e-16
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 416
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 417 FEAGISKNGQTREHALLA 470
E QT+EH +LA
Sbjct: 146 ME-------QTKEHLILA 156
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.0 bits (129), Expect = 1e-08
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 2e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.0 bits (124), Expect = 5e-08
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 43.6 bits (98), Expect = 7e-05
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 396 VAAGTG 413
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 396 VAAGTG 413
V +G
Sbjct: 141 VDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.1 bits (82), Expect(2) = 4e-04
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 198 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 374
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 375 ADCAVLIVAAGTG 413
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 4e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 IVVIGHVDSGKST 116
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 35.9 bits (79), Expect = 0.015
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMG 200
+IRD P K+ + + V+G+VD+GKST G L + G RT K E G
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESG 186
Query: 201 KGSFKYAWVL------DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMIT 362
+ S +L + + +D + K VT ID GH ++K I
Sbjct: 187 RTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIF 245
Query: 363 GTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFT 476
G + D +L++ A G G T+EH LA +
Sbjct: 246 GMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALS 278
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.080
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.080
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 413
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.1 bits (72), Expect = 0.11
Identities = 33/133 (24%), Positives = 58/133 (43%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 251
+N+ ++GHVDSGK+T T + + + F+ A R
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA------ELGSTSAFDAHATSTTTDGI------------R 55
Query: 252 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 431
+ + + +G+ + +ID PGH I+ ++ ++ D A++I+ + AGI
Sbjct: 56 RNTLDLGFSTMTSLSGRR-LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGI 109
Query: 432 SKNGQTREHALLA 470
QT EH LLA
Sbjct: 110 QP--QTAEHLLLA 120
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 137
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 30.7 bits (66), Expect = 0.57
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Frame = +3
Query: 27 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMG 200
+++R P+ ++ + + + V+G D GKST G L C G K I F + E+
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVR 212
Query: 201 KGSFKYAWVLDKLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGT 368
G K + V + + RG ++ A E VT+ID G + K I G
Sbjct: 213 TG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGL 270
Query: 369 S--QADCAVLIVAAGTG 413
+ A L+VAA G
Sbjct: 271 TGYTPHFACLVVAADRG 287
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 306 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 329 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 240
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 315 IIDAPGHRDFIKNMITGTSQADCAVLIV 398
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 282 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 404
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 33 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 203
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 425 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 294
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,908,610
Number of Sequences: 27780
Number of extensions: 223690
Number of successful extensions: 821
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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