Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L21
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.21 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   0.84 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   4.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   4.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   7.8  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 324 CNLRTASATRARCSNSLSTRSTGS 253
           C+L TAS+T +  S+  S RS GS
Sbjct: 176 CSLGTASSTSSTASSRNSDRSAGS 199


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 159 LLDCSGRLSCSVV*RFSYLDFSFNIMMDNGLDLLCNGLEISP 34
           +L  S R+   V+  F + D +F I++ N  DL+ N   ISP
Sbjct: 376 VLAVSNRIQ-KVIYGFDFNDVNFRILIANVNDLIKNTRCISP 416


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 170 IEELTLGLKQKLHLQARARAAPYYIRKQEPVD 265
           +E + LG   ++H      AAP  +  +E VD
Sbjct: 433 LEAVNLGSACRIHGSPATTAAPPQLPTEESVD 464


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +2

Query: 188 GLKQKLHLQARARAAPYYIRKQEPVDLVERLLEQRALVAEAVRRLQEKKQP 340
           GL+ + +  ARA   P+  + +  V+ + + L     V E   R  +   P
Sbjct: 629 GLRDRKYPDARAMGYPFDRQPRAGVETLAQFLTGNMAVTEVTVRFSDTIVP 679


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 89  LKEKSRYENRHTTEQDSRPLQS 154
           +KEK    N  TTE++ + ++S
Sbjct: 375 IKEKCDRRNGKTTEENPKSIKS 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,190
Number of Sequences: 438
Number of extensions: 1733
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)