Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L20
(425 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 194 5e-51
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 185 2e-48
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 97 1e-21
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 90 2e-19
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 31 0.099
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.099
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.40
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 27 1.6
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 26 2.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 2.8
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 3.7
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 4.9
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 4.9
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 4.9
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 24 8.6
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 24 8.6
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 24 8.6
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 24 8.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 24 8.6
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 194 bits (473), Expect = 5e-51
Identities = 84/114 (73%), Positives = 96/114 (84%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 263 DVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 424
VPR+++VDLEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHYT+GKE+
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKEL 114
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 185 bits (451), Expect = 2e-48
Identities = 85/119 (71%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSE 247
MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSE
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59
Query: 248 TGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 424
TG GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHYT+GKE+
Sbjct: 60 TGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEM 118
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 96.7 bits (230), Expect = 1e-21
Identities = 47/114 (41%), Positives = 64/114 (56%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE + + GQ G Q+G A W EHG+ G T + N +F+E GK
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58
Query: 263 DVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 424
VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAEL 112
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 89.8 bits (213), Expect = 2e-19
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKD 265
RE I++ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++ +
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRY 60
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGH 403
+PRA+ +DLEP VV+ + + TY L++PE ++ K A NN+A G+
Sbjct: 61 IPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANGY 108
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 30.7 bits (66), Expect = 0.099
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Frame = +3
Query: 93 ASLYTLAKPESRSEMPAGSCIALSTASNLMVR-CQLTRPSGVETT---PSTRSSARPEL- 257
A+ Y + E + ++ G I TA N + + R G + P+T+S A+ +
Sbjct: 57 AAYYVVRDAEKKGKLSRGGTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTL 116
Query: 258 ----ARTFPVPSSSILNPL*LTRSALAHTDS 338
A PVP + NPL A H +S
Sbjct: 117 KFLGAEVHPVPVAPFSNPLNYNHQARRHAES 147
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.7 bits (66), Expect = 0.099
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+S+ + P + S + S ++++S L +T + V + TP T S+A
Sbjct: 1221 STPITSSSVLNSSTPITSSSI-LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTA-- 1277
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1278 -LNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 1328
Score = 30.3 bits (65), Expect = 0.13
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 123 SRSEMPAGSCIALSTASNLM--VRCQLTRPSGVET-TPSTRSSARPELARTFPVPSSSIL 293
SRS P + ++S A+ Q+T P+ V + TP T SS L + P+ SSSIL
Sbjct: 346 SRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSV---LNSSTPITSSSIL 402
Query: 294 N-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 413
N +T S++ ++ + ++ L+ + +T+L +TP+
Sbjct: 403 NTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPI 444
Score = 29.1 bits (62), Expect = 0.30
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+S+ + P S S + + + I STA N +T S + + TP T S+A
Sbjct: 633 STPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTST--PITSSSVLNSSTPITSSTA- 689
Query: 249 PELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPLERK 422
L + P+ SSS+LN S+ A S I ++ L P T T L +TP+
Sbjct: 690 --LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSS 747
Query: 423 S 425
S
Sbjct: 748 S 748
Score = 29.1 bits (62), Expect = 0.30
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+S+ + P + S + S +++++ L +T S + + TP T SS
Sbjct: 945 STPITSSSVLNSSTPITSSTV-LNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV-- 1001
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1002 -LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1052
Score = 28.7 bits (61), Expect = 0.40
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+S+ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 453 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA- 509
Query: 249 PELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 510 --LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 560
Score = 28.3 bits (60), Expect = 0.53
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELART 266
S +L T S S + + + I STA N +T S + + TP T S+A L +
Sbjct: 687 STALNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTPITSSTA---LNTS 741
Query: 267 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 742 TPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNT 788
Score = 27.9 bits (59), Expect = 0.70
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+A
Sbjct: 1725 STPITSSTVVNSSTPITSSTV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA-- 1781
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1782 -LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1832
Score = 27.9 bits (59), Expect = 0.70
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALST--ASNLMVRCQLTRPSGVETTPSTRSSARPELAR 263
S + +L S + + + S + ST S+ +V S ST ++ L
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 264 TFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2625 STPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2672
Score = 27.9 bits (59), Expect = 0.70
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+A
Sbjct: 2793 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTA-- 2849
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2850 -LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2900
Score = 27.9 bits (59), Expect = 0.70
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+++ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 2889 STPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA- 2945
Query: 249 PELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2946 --LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2996
Score = 27.5 bits (58), Expect = 0.92
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+S+ + P + S + S ++++S L +T + V T TP T S+
Sbjct: 789 STPITSSSVLNSSTPITSSTV-LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV-- 845
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
+ + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 846 -VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 896
Score = 27.5 bits (58), Expect = 0.92
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+A
Sbjct: 1557 STPITSSTVVNTSTPITSSSV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA-- 1613
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 413
L + P+ SSS+LN S+ S I ++ +L P T+ VV +TP+
Sbjct: 1614 -LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPI 1668
Score = 27.5 bits (58), Expect = 0.92
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
+T S+S+ + P + S + S +++++ L +T S + ++ + SS+
Sbjct: 3177 STAITSSSIVNSSTPITSSSV-LNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSS--V 3233
Query: 255 LARTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN +T S + +T S I ++ L P T+ VV T
Sbjct: 3234 LNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVNT 3284
Score = 26.6 bits (56), Expect = 1.6
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+A
Sbjct: 1821 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA-- 1877
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPLERKS 425
L + P+ SSS+LN S+ S I ++ +L P T+ V+ +TP+ S
Sbjct: 1878 -LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSS 1936
Score = 26.6 bits (56), Expect = 1.6
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+A
Sbjct: 2013 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA-- 2069
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPLERKS 425
L + P+ SSS+LN S+ S I ++ +L P T+ V+ +TP+ S
Sbjct: 2070 -LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSS 2128
Score = 26.2 bits (55), Expect = 2.1
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELART 266
S +L T S S + + + I ST N +T + V + TP T S+A L +
Sbjct: 1023 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1077
Query: 267 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 1078 TPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT 1124
Score = 26.2 bits (55), Expect = 2.1
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+S+ + P S S + + + I ST N +T S + + TP T S+A
Sbjct: 1917 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSST--PITSSSVLNSSTPITSSTA- 1973
Query: 249 PELARTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN +T S++ +T S I ++ L P T+ VV T
Sbjct: 1974 --LNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSSTVVNT 2024
Score = 26.2 bits (55), Expect = 2.1
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+S+ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 1989 STPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA- 2045
Query: 249 PELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 413
L + P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 2046 --LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 2100
Score = 26.2 bits (55), Expect = 2.1
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELARTF 269
S +L T S S + + + I STA N +T S + ++ + SS+ L +
Sbjct: 3303 STTLNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTAITSSSI--LNSST 3358
Query: 270 PVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 413
PV SSS+LN S+ S I ++ +L P T+ V+ +TP+
Sbjct: 3359 PVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 3408
Score = 25.8 bits (54), Expect = 2.8
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +3
Query: 129 SEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELARTFPVPSSSILNPL* 305
S S ++++S L +T S + T TP T SS L + P+ SSSILN
Sbjct: 374 SPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV---LNSSTPITSSSILNSST 430
Query: 306 LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPLERKS 425
S+ S I ++ +L P T+ V+ +TP+ S
Sbjct: 431 PITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSS 472
Score = 25.8 bits (54), Expect = 2.8
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +3
Query: 147 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELARTFPVPSSSILNPL*LTRSAL 323
S ++++S L +T + + T TP T SS L + P+ SSS+LN S+
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLNSSTPITSST 664
Query: 324 AHTDSCFIQNNLSLVRRMPQT--TMLVVTTPLERKS 425
A S I ++ L P T T L +TP+ S
Sbjct: 665 ALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSS 700
Score = 25.8 bits (54), Expect = 2.8
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+S+ + P + S + + +++++S L +T S + + TP T S+
Sbjct: 2397 STPITSSSVLNSSTPITSSTV-VNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTV-- 2453
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
+ + P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2454 -VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 2504
Score = 25.8 bits (54), Expect = 2.8
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+++ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 2661 STPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA- 2717
Query: 249 PELARTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN +T S + +T S I ++ L P T+ VV T
Sbjct: 2718 --LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVNT 2768
Score = 25.8 bits (54), Expect = 2.8
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S++ + P + S + S A++++S + +T S + + TP T S+
Sbjct: 3153 STPITSSTTLNTSTPITSSSV-LNSSTAITSSSIVNSSTPITSSSVLNSSTPITSSTT-- 3209
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 3210 -LNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNT 3260
Score = 25.8 bits (54), Expect = 2.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 219 TTPSTRSSARPELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 398
+TP T S+A L + P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 3381 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 399 V--TTPLERKS 425
V +TP+ S
Sbjct: 3438 VNSSTPITSSS 3448
Score = 25.4 bits (53), Expect = 3.7
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELART 266
S +L T S S + + + I ST N +T + V + TP T S+A L +
Sbjct: 1803 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1857
Query: 267 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 413
P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 1858 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1908
Score = 25.4 bits (53), Expect = 3.7
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +3
Query: 75 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 248
+T S+S+ + P S S + + + I ST N +T S + + TP T S+A
Sbjct: 2109 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSST--PITSSSVLNSSTPITSSTA- 2165
Query: 249 PELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN S+ S I ++ + P T+ VV T
Sbjct: 2166 --LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNT 2216
Score = 25.4 bits (53), Expect = 3.7
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ + +T + V + TP T S+A
Sbjct: 2253 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTA-- 2309
Query: 252 ELARTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 407
L + P+ SSS+LN +T S + +T S I ++ L P T+ VV T
Sbjct: 2310 -LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVNT 2360
Score = 25.0 bits (52), Expect = 4.9
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARP 251
+T S+++ + P + S + S +++++ L +T S + + TP T S+
Sbjct: 885 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTG-- 941
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPLERKS 425
L + P+ SSS+LN S+ S I ++ +L P T+ V+ +TP+ S
Sbjct: 942 -LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSS 1000
Score = 24.6 bits (51), Expect = 6.5
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 75 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
+T S+++ + P + S + S +++++ L +T S + ++ + SS
Sbjct: 3273 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTA-- 3329
Query: 255 LARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 413
L + P+ SSS+LN S+ S + ++ L P T+ VV +TP+
Sbjct: 3330 LNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPI 3384
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.40
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 123 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELARTFPVPSSSILN 296
S S + + + ST S+L ++PS T+ ST SSA P + + SSS+++
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 1.6
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 66 KKLNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSA 245
K LN V+ +A + S P+ +C + + + N + + TTP+T S
Sbjct: 82 KFLNKDFVTVDPLRIASVTTYSAQPSNNCSSATDSENDFQSFTIKSSTTYHTTPTTASEN 141
Query: 246 RPELARTFPVPSSSILNPL*LT 311
+ + T P +S+ N L L+
Sbjct: 142 KKIESITIP-DHASVYNDLPLS 162
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 26.2 bits (55), Expect = 2.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 252 ELARTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV 401
E+ F VP +S LNP S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 2.8
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +3
Query: 102 YTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELARTFPVPS 281
++ A+ + S+ + S + Q +PSGVE T ++R++A+ + T + S
Sbjct: 12 FSYARALASSQSNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQKKTESTGKITS 71
Query: 282 SS 287
+
Sbjct: 72 EA 73
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.4 bits (53), Expect = 3.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 204 PSGVETTPSTRSSARPELARTFPV 275
P+ VETTPST +SA + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 4.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 212 PRWSCQLASDHQVGCRAQGNTAPSRHFRSGLR 117
P SC+L S+H+ C + N++ S + + R
Sbjct: 110 PHLSCELPSEHREKCLKRRNSSLSSNLHANKR 141
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 312 RSALAHTDSCFIQNNLSLVRRMPQT 386
+S + HT++ NN SL+RR+ T
Sbjct: 605 KSLIQHTNNLLQSNNASLLRRLAAT 629
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 4.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 241 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGL 113
EE EG TP +T+R D+V++ + AG++D+ S L
Sbjct: 320 EEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLTDVISEL 362
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 24.2 bits (50), Expect = 8.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 72 LNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSA 245
LNT C+ + + + +E A S I+ TA NL+ C L+ P +P+ +++A
Sbjct: 132 LNTFCLGKTAPSDKNRYTTTECLACSKISNETAENLLFLC-LSSPWIFRASPTLQNTA 188
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 370 LTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVST 212
L D+L + L + SA + G+ D+D NV+A G ++R E + T
Sbjct: 327 LLYDQLTPITPLMLALSAGTPAFRGYLADQDCRWNVIA--GAVDDRTEEEMKT 377
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 24.2 bits (50), Expect = 8.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 228 STRSSARPELARTFPVPSSSILN 296
S +S A+PEL RT SSS ++
Sbjct: 111 SAKSKAKPELLRTLTSKSSSAVD 133
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 24.2 bits (50), Expect = 8.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 241 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVY 101
E+ V GVV + + W L++ LD + + G+ D+ L ++
Sbjct: 399 EDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIH 445
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 24.2 bits (50), Expect = 8.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 117 PESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELARTFPVPS 281
P S S + LST+S ++ T SG PST SS + P+ S
Sbjct: 483 PISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTS 537
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,906,011
Number of Sequences: 5004
Number of extensions: 40274
Number of successful extensions: 183
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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