Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L19
         (337 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59RR4 Cluster: Putative uncharacterized protein; n=1; ...    35   0.31 
UniRef50_Q9RUZ9 Cluster: Putative uncharacterized protein; n=2; ...    31   5.1  
UniRef50_A5NRG2 Cluster: UDP-galactopyranose mutase; n=1; Methyl...    31   5.1  
UniRef50_A1ZR11 Cluster: Fibronectin, type III, putative; n=2; M...    31   5.1  
UniRef50_Q4STZ2 Cluster: Chromosome 10 SCAF14066, whole genome s...    30   8.9  

>UniRef50_Q59RR4 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 671

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -2

Query: 264 IRNTEA*LGEGRSPNLKLVNP---KKTQQKAISYTSEPPPANILNKLAKLHKCHLDFS 100
           IR+ E  LGEG++P L L  P   K   +KA S+T  PP   +  K+ +L    L  S
Sbjct: 494 IRDEEKDLGEGKTPQLVLSKPGRPKLLPKKAFSFTKSPPQTPV-GKVKRLQSTQLTSS 550


>UniRef50_Q9RUZ9 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Deinococcus radiodurans
          Length = 802

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -1

Query: 226 SEPETGESQKDTTESNFLYIRTATCKHS 143
           S+PETG S K  T+ ++ Y+RT TC+++
Sbjct: 535 SDPETGTSLKTYTKPHY-YVRTVTCQNT 561


>UniRef50_A5NRG2 Cluster: UDP-galactopyranose mutase; n=1;
           Methylobacterium sp. 4-46|Rep: UDP-galactopyranose
           mutase - Methylobacterium sp. 4-46
          Length = 369

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 194 VFLGFTSFRFGLRPSPSYASVLRMCKIIVNY 286
           VFLG+TS ++GLRP    ASV     + V+Y
Sbjct: 152 VFLGYTSKQWGLRPDEIDASVTNRVPVRVSY 182


>UniRef50_A1ZR11 Cluster: Fibronectin, type III, putative; n=2;
           Microscilla marina ATCC 23134|Rep: Fibronectin, type
           III, putative - Microscilla marina ATCC 23134
          Length = 920

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 106 IQVAFMQFSKFIENVCRWRF*CIGNCFLLCLFGIHQF 216
           I+ A    ++    V +W F     CF LCLF +H F
Sbjct: 14  IKTALWTITQVFRRVAKWSF----GCFFLCLFSVHTF 46


>UniRef50_Q4STZ2 Cluster: Chromosome 10 SCAF14066, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
           SCAF14066, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 955

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 65  GNCGVTSNIITQLKSKWHLCNLASLLRMFAGG 160
           G  G+ SN+ T   S WHL ++ +L R+  GG
Sbjct: 133 GGDGLLSNLQTHSGSNWHLWDIINLTRISEGG 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,834,230
Number of Sequences: 1657284
Number of extensions: 6500705
Number of successful extensions: 16835
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16834
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)