Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L17
         (304 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.         95   2e-20
AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-P...    95   2e-20
AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-P...    95   2e-20
AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-P...    95   2e-20
AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p pro...    83   5e-17
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz...    29   1.5  
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE...    29   1.5  
AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p pro...    28   2.0  
AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-P...    28   2.0  
BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p pro...    28   2.6  
AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-P...    28   2.6  
BT003268-1|AAO25025.2|  351|Drosophila melanogaster LD20971p pro...    27   4.6  
AE014298-2499|AAF48680.1|  351|Drosophila melanogaster CG4880-PA...    27   4.6  
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    27   4.6  
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    27   4.6  
BT025956-1|ABG02200.1|  197|Drosophila melanogaster IP15645p pro...    27   6.0  
AF181625-1|AAD55411.1|  770|Drosophila melanogaster semaphorin-l...    26   8.0  
AF007158-1|AAC19159.1|  770|Drosophila melanogaster similar to s...    26   8.0  
AE013599-2532|AAS64817.1|  770|Drosophila melanogaster CG6446-PB...    26   8.0  
AE013599-2531|AAF57816.1|  770|Drosophila melanogaster CG6446-PA...    26   8.0  

>U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.
          Length = 76

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 33  MAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKKGNL 185
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNL 51


>AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-PC,
           isoform C protein.
          Length = 76

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 33  MAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKKGNL 185
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNL 51


>AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-PB,
           isoform B protein.
          Length = 76

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 33  MAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKKGNL 185
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNL 51


>AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-PA,
           isoform A protein.
          Length = 76

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 33  MAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKKGNL 185
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNL 51


>AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p
           protein.
          Length = 56

 Score = 83.4 bits (197), Expect = 5e-17
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +3

Query: 33  MAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRF 167
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQ +
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQHY 45


>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
            hyperpolarization-activated ionchannel variant
            DMIH-A1B2C2 protein.
          Length = 1319

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 110  LLRFFNSISMSFSVLVMICMILRLGHFA 27
            +L+F N  S+   +  +ICM+L +GH++
Sbjct: 926  ILKFLNMASVFMRIFNLICMMLLIGHWS 953


>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
            isoform E protein.
          Length = 1327

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 110  LLRFFNSISMSFSVLVMICMILRLGHFA 27
            +L+F N  S+   +  +ICM+L +GH++
Sbjct: 934  ILKFLNMASVFMRIFNLICMMLLIGHWS 961


>AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 15   YGNLSEMAKSKNHTNHNQNRKAHRNGIK 98
            Y    ++A+  NH NHNQ ++ H+  +K
Sbjct: 1078 YAEEHDVAEPANHHNHNQGQQNHQGHLK 1105


>AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-PA
            protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 15   YGNLSEMAKSKNHTNHNQNRKAHRNGIK 98
            Y    ++A+  NH NHNQ ++ H+  +K
Sbjct: 1078 YAEEHDVAEPANHHNHNQGQQNHQGHLK 1105


>BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p
           protein.
          Length = 1102

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 6   RVIYGNLSEMAKSKNHTNHNQNRKAHRNGIKKP 104
           ++ Y +  + AK   H +HNQNR + R+ +  P
Sbjct: 62  KISYSSYQQHAKDLKHQSHNQNR-SKRSSLSSP 93


>AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-PA
           protein.
          Length = 1102

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 6   RVIYGNLSEMAKSKNHTNHNQNRKAHRNGIKKP 104
           ++ Y +  + AK   H +HNQNR + R+ +  P
Sbjct: 62  KISYSSYQQHAKDLKHQSHNQNR-SKRSSLSSP 93


>BT003268-1|AAO25025.2|  351|Drosophila melanogaster LD20971p
           protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 9   VIYGNLSEMAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRN 158
           +I   +SE  KS NHT H Q ++     I     ++      MD + LRN
Sbjct: 221 IINEMISEGEKSANHTEHPQQKRLTIVFIFNVNSMQPGEEFEMDMEILRN 270


>AE014298-2499|AAF48680.1|  351|Drosophila melanogaster CG4880-PA
           protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 9   VIYGNLSEMAKSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRN 158
           +I   +SE  KS NHT H Q ++     I     ++      MD + LRN
Sbjct: 221 IINEMISEGEKSANHTEHPQQKRLTIVFIFNVNSMQPGEEFEMDMEILRN 270


>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
           isoform B protein.
          Length = 3313

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 42  SKNHTNHNQNRKAHRNG 92
           SKN+ NHNQN+    NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
           isoform A protein.
          Length = 3313

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 42  SKNHTNHNQNRKAHRNG 92
           SKN+ NHNQN+    NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560


>BT025956-1|ABG02200.1|  197|Drosophila melanogaster IP15645p
           protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 31  KWPSRRIIQIITKTEKLIEM-ELKNRRRSDT 120
           +WPS R  QI T+T + I M    NR  S+T
Sbjct: 143 RWPSPRTTQITTRTRRPIVMASSDNRNGSNT 173


>AF181625-1|AAD55411.1|  770|Drosophila melanogaster semaphorin-like
           protein.
          Length = 770

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  KSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFL 152
           K+K+     Q  ++HRN   KP + +H++T G D   L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719


>AF007158-1|AAC19159.1|  770|Drosophila melanogaster similar to
           semaphorin-I protein.
          Length = 770

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  KSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFL 152
           K+K+     Q  ++HRN   KP + +H++T G D   L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719


>AE013599-2532|AAS64817.1|  770|Drosophila melanogaster CG6446-PB,
           isoform B protein.
          Length = 770

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  KSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFL 152
           K+K+     Q  ++HRN   KP + +H++T G D   L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719


>AE013599-2531|AAF57816.1|  770|Drosophila melanogaster CG6446-PA,
           isoform A protein.
          Length = 770

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  KSKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFL 152
           K+K+     Q  ++HRN   KP + +H++T G D   L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,716,960
Number of Sequences: 53049
Number of extensions: 183946
Number of successful extensions: 802
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)