Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L16
         (284 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   4.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   4.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   7.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 51   IFPCYYI*Q*KNYELLEANLNTVIPRLA 134
            I P   I +   ++++ ANLN V+P +A
Sbjct: 1589 IAPAREIPKEDTFQIILANLNLVVPVVA 1616


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -2

Query: 280 LCNIYSY--FPRHNTSILFTLCLYVLF 206
           LC  Y Y  F      +LF LC+Y  F
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFF 170


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 125 PLSATPLRAVSL*RECQISRSNASHYAKE 211
           P  ATP R V       I R     YA+E
Sbjct: 16  PYDATPARIVCYFSNWAIYRPGIGRYAQE 44


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 236  NRCIVPWKIRV 268
            NRC  P KIR+
Sbjct: 1113 NRCFFPSKIRI 1123


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 203 RNARHLSAKFDIRVIV 156
           +NA+ L  KFD++ +V
Sbjct: 269 KNAQKLRHKFDLKTLV 284


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 261 IFHGTIHLFSLHYVY 217
           +F   I+LF+++Y+Y
Sbjct: 146 VFCYFIYLFTVYYIY 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,698
Number of Sequences: 336
Number of extensions: 1234
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)