Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L16
         (284 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ...    33   0.075
BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p pro...    31   0.30 
AE014296-3134|AAO41227.1|  405|Drosophila melanogaster CG9614-PH...    31   0.30 
AE014296-698|AAS64961.1|  531|Drosophila melanogaster CG12006-PB...    31   0.30 
AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA...    31   0.30 

>AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ,
           isoform J protein.
          Length = 401

 Score = 32.7 bits (71), Expect = 0.075
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 260 FSTAQYIYSLYIMSIRTLSRNARHLSAKFDIRVIVKPRVTGSR*AGYYC 114
           F+ A+++Y L+  SIR  +RN R      D+R +V+   T      Y+C
Sbjct: 335 FNHARFLYKLHSKSIRNRNRNNRKPHIDADVREMVRRNFTNEYEFYYFC 383


>BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p
           protein.
          Length = 561

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 99  EANLNTVIPRLARPRYARFHYNANVKFRAQMPRITRKSTYRHNVKR 236
           +AN+  ++P  + P Y+  H N  ++F    P + +K  Y+    R
Sbjct: 377 QANILFLMPCHSTPYYSHIHQNVTMRFLTCEPNLEKKEQYKDEADR 422


>AE014296-3134|AAO41227.1|  405|Drosophila melanogaster CG9614-PH,
           isoform H protein.
          Length = 405

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 260 FSTAQYIYSLYIMSIRTLSRNARHLSAKFDIRVIVKPRVTGSR*AGYYC 114
           F+ A+ I++LY  S++  +RN R      D+R +V+   T      Y+C
Sbjct: 335 FARAKMIFNLYQKSLQNRNRNNRKPHVDADVRAMVRRNFTHEYDFYYFC 383


>AE014296-698|AAS64961.1|  531|Drosophila melanogaster CG12006-PB,
           isoform B protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 99  EANLNTVIPRLARPRYARFHYNANVKFRAQMPRITRKSTYRHNVKR 236
           +AN+  ++P  + P Y+  H N  ++F    P + +K  Y+    R
Sbjct: 377 QANILFLMPCHSTPYYSHIHQNVTMRFLTCEPNLEKKEQYKDEADR 422


>AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA,
           isoform A protein.
          Length = 561

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 99  EANLNTVIPRLARPRYARFHYNANVKFRAQMPRITRKSTYRHNVKR 236
           +AN+  ++P  + P Y+  H N  ++F    P + +K  Y+    R
Sbjct: 377 QANILFLMPCHSTPYYSHIHQNVTMRFLTCEPNLEKKEQYKDEADR 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,322,281
Number of Sequences: 53049
Number of extensions: 177840
Number of successful extensions: 272
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)