Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L14
(483 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 200 1e-50
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 161 8e-39
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 160 2e-38
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 140 1e-32
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 138 8e-32
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 122 4e-27
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 110 2e-23
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 108 7e-23
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 105 5e-22
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 101 8e-21
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 101 1e-20
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 95 7e-19
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 91 9e-18
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 91 2e-17
UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n... 57 2e-07
UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n... 57 2e-07
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 51 1e-05
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 49 5e-05
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 46 6e-04
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 44 0.002
UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7; Bacteria... 40 0.039
UniRef50_Q8TX51 Cluster: 50S ribosomal protein L1P; n=1; Methano... 40 0.039
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 39 0.068
UniRef50_Q2FQ32 Cluster: Ribosomal protein L1; n=4; Methanomicro... 39 0.068
UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1; Enceph... 38 0.090
UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8; Alphapro... 35 0.84
UniRef50_O67759 Cluster: 50S ribosomal protein L1; n=40; Bacteri... 33 2.6
UniRef50_Q88KW9 Cluster: Chorismate mutase family protein; n=2; ... 33 3.4
UniRef50_Q8EX24 Cluster: 50S ribosomal protein L1; n=2; Mycoplas... 33 3.4
UniRef50_Q97E83 Cluster: Putative uncharacterized protein CAC323... 33 4.5
UniRef50_Q75WV2 Cluster: Putative uncharacterized protein HMA7; ... 32 5.9
UniRef50_Q2Y4X8 Cluster: LSU ribosomal protein L1P; n=1; uncultu... 32 5.9
UniRef50_UPI000038D29C Cluster: COG2931: RTX toxins and related ... 32 7.8
UniRef50_A3BW74 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_Q82DQ8 Cluster: 50S ribosomal protein L1; n=52; Bacteri... 32 7.8
UniRef50_Q6A6K3 Cluster: 50S ribosomal protein L1; n=20; Bacteri... 32 7.8
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 200 bits (488), Expect = 1e-50
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 161 bits (391), Expect = 8e-39
Identities = 76/132 (57%), Positives = 96/132 (72%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
MSK+ D L E ++ + S+EK+RKF+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRP
Sbjct: 1 MSKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 233 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIP 412
KM+VC+LGD QH +EA+++ + MD E + A LASE++IKQIP
Sbjct: 61 KMKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 413 RLLGPGLNKAGK 448
RLLGPGLNKAGK
Sbjct: 121 RLLGPGLNKAGK 132
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 160 bits (388), Expect = 2e-38
Identities = 76/118 (64%), Positives = 87/118 (73%)
Frame = +2
Query: 98 VIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCDE 277
V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK P PK VC++GDQQHCDE
Sbjct: 183 VLHGNQRKRRKFLETVELQITLKNYDPQKDKRFSGTVRLKSTPCPKFSVCVVGDQQHCDE 242
Query: 278 AKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKAGKF 451
AK +D+P MD E +DA LASESLIKQIPR+LGPGLNKAGKF
Sbjct: 243 AKAVDIPHMDIEMLKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKF 300
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 140 bits (340), Expect = 1e-32
Identities = 64/85 (75%), Positives = 70/85 (82%)
Frame = +2
Query: 59 KVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 238
KVSRD LYE V V SKEKKRKFLET+ELQ+ LKNYDPQKDKRFSGTVKL++IPRPK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVKLRHIPRPKF 60
Query: 239 QVCILGDQQHCDEAKQLDVPCMDAE 313
+CILGDQQH DEAK +PCMD E
Sbjct: 61 SMCILGDQQHLDEAKANGIPCMDME 85
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 138 bits (333), Expect = 8e-32
Identities = 71/144 (49%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQSSKE-KKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSK++ + E V+ +++ S E KKR FLETVELQ+GLKNYDPQ+DKRFSGT+KL +PR
Sbjct: 1 MSKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPR 60
Query: 230 PKMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQI 409
P M CI GD D AK L V M + ++A +ASE LIKQI
Sbjct: 61 PNMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESM 481
PRLLG L+KAG+FP +SH + +
Sbjct: 121 PRLLGRTLSKAGQFPTPVSHNDDL 144
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 122 bits (294), Expect = 4e-27
Identities = 59/143 (41%), Positives = 88/143 (61%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
MSK+S + L + ++ S KKR+F ETVELQIGL++Y+P KDKRF+G++KL +P P
Sbjct: 1 MSKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIKLPNMPYP 58
Query: 233 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIP 412
++ I+G +HC+EAK + C+D E +D L SE+L+KQ+P
Sbjct: 59 NKKIAIIGTMRHCEEAKAAGIACIDTEGLKKFNKEPKLIKKWFKPYDTLLCSETLMKQLP 118
Query: 413 RLLGPGLNKAGKFPGLLSHQESM 481
+L G L+K GKFP ++ ES+
Sbjct: 119 KLCGNVLSKIGKFPISITEGESV 141
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 110 bits (264), Expect = 2e-23
Identities = 56/113 (49%), Positives = 71/113 (62%)
Frame = +2
Query: 143 VELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCDEAKQLDVPCMDAEXXX 322
V LQI L+N D Q D+RFSGT++LK+ PR K +C+LGDQQHCDEAK + +P M+ E
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALK 72
Query: 323 XXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESM 481
FDA LA ESL+ QI LGP LNKAGKFP +H +++
Sbjct: 73 KLNKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNI 122
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 108 bits (259), Expect = 7e-23
Identities = 55/145 (37%), Positives = 85/145 (58%)
Frame = +2
Query: 47 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 226
+ MSK+ + L + ++ ++ ++ KKR F ET ELQI L++YD QKDKRF G+ +L + P
Sbjct: 23 LAMSKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLHAP 80
Query: 227 RPKMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQ 406
P +++ ++G+ HCD+AK L + +D + FD +ASESL+K
Sbjct: 81 YPNIKIGVIGNLTHCDQAKALGLTAIDQDGLKKFNKEKKPIKKWCKPFDILIASESLMKV 140
Query: 407 IPRLLGPGLNKAGKFPGLLSHQESM 481
IPRL+G K GKFP + ES+
Sbjct: 141 IPRLVGNVFTKIGKFPIAIPETESV 165
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 105 bits (252), Expect = 5e-22
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Frame = +2
Query: 113 KEKK-RKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCDEAKQL 289
KEKK RKF ET EL + LKNYDP KDKR GT KL + + +VC+LGD Q C+ A++
Sbjct: 14 KEKKERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKE 73
Query: 290 DVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKAGKFPGLLSH 469
++P MD + ++ L S+S+ +Q+ ++LGPGLNK GKFP L
Sbjct: 74 NIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGK 133
Query: 470 QESM 481
E +
Sbjct: 134 NEDL 137
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 101 bits (242), Expect = 8e-21
Identities = 48/134 (35%), Positives = 80/134 (59%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
M+ + ++TL + + V++ +K KKR FLETV++Q+ LK Y+ KDKRF G++KL +I RP
Sbjct: 1 MTHLHQETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHIIRP 60
Query: 233 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIP 412
+++ +LG++ HC+EA++L++P D LAS +I Q+
Sbjct: 61 NVRIGVLGNKVHCEEAQKLNIPAYDLPTLTNFNKEKKVVKAWTKRHHLFLASPDVIGQVN 120
Query: 413 RLLGPGLNKAGKFP 454
++LG +A KFP
Sbjct: 121 KVLGQVYTRANKFP 134
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 101 bits (241), Expect = 1e-20
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQ-SSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
M +++ + L + + +I+ ++ EK RKFLETVELQ+GLK YDP+KD RF+ + L +I +
Sbjct: 5 MQRINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFNLPLVLPHIAK 64
Query: 230 PKMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQI 409
+++C++ D + D AK+L + ++ E +D LAS+SLI+QI
Sbjct: 65 QNLKLCVIADARDADRAKKLGLNYVEIEHLQQFNKDAKQIKKFAKSYDVFLASKSLIRQI 124
Query: 410 PRLLGPGLNKAGKFPGLLSHQESM 481
GPG KAG+ P L+ E +
Sbjct: 125 TVYAGPGFTKAGRTPLPLAPDEDL 148
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 95.1 bits (226), Expect = 7e-19
Identities = 51/134 (38%), Positives = 70/134 (52%)
Frame = +2
Query: 53 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
M S+ + + + KKR F+E VEL LK+ + +K K+ SG VKL + PR
Sbjct: 1 MPSTSKLEFIKAIKDIKNPDLNKKRNFIEKVELNFSLKSINFKKHKKISGGVKLPFGPRR 60
Query: 233 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIP 412
+++C+L DQ+H EAK L + +D F+ +ASESLIK IP
Sbjct: 61 AVKICMLADQRHITEAKNLGLYYLDINQIKLLKNKKKVLKKLVKKFEVFIASESLIKIIP 120
Query: 413 RLLGPGLNKAGKFP 454
R LGP L K GKFP
Sbjct: 121 RYLGPALAKVGKFP 134
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 91.5 bits (217), Expect = 9e-18
Identities = 43/63 (68%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKL-KYIPRP 232
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+L + P P
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLAPFCPHP 62
Query: 233 KMQ 241
++
Sbjct: 63 ALR 65
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +2
Query: 47 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 226
++ K++ DTL E V+ +++ SKEK RKF+ETVELQIGLKNYDPQKDKRF+GTV L IP
Sbjct: 72 VQSGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTVNLPVIP 131
Query: 227 RP 232
RP
Sbjct: 132 RP 133
>UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n=1;
Bos taurus|Rep: UPI0000F33BDC UniRef100 entry - Bos
Taurus
Length = 172
Score = 57.2 bits (132), Expect = 2e-07
Identities = 41/108 (37%), Positives = 57/108 (52%)
Frame = -3
Query: 472 LVG*ETRELASLIETRTKETRNLLDQ*FRCKASIKLFS*FLHKLLVLI*FFQSLCIHARY 293
+VG + RELA L++ +++ +LLDQ + I L L + LVL+ F Q C H
Sbjct: 63 IVGQQGRELARLVQAWAQDSWDLLDQRLGSRKGIILLGQLLDQFLVLVEFPQ--C-HVGD 119
Query: 292 I*LFSLIAVLLITENAHLHLRTRDVLKLDGAGETLVLLRVIVLETDLQ 149
I VLL+ ++ H LK DGA E VLLRVI L+ DL+
Sbjct: 120 IHSLGFFTVLLVPQDTHGEFGAGSGLKPDGAQEIFVLLRVIGLQADLK 167
>UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 175
Score = 57.2 bits (132), Expect = 2e-07
Identities = 35/79 (44%), Positives = 38/79 (48%)
Frame = -1
Query: 408 ICLINDSDARQXXXXXXXXXXXXXXXXXXXXXXXSMQGTSNCLASSQCC*SPRMHTCILG 229
ICLI DSDAR+ SM+ ASSQC SP MH G
Sbjct: 97 ICLITDSDARKCWYFFASFLMSFLFLLSFLSASTSMESMPLPAASSQCLASPSMHILSFG 156
Query: 228 RGMYLSLTVPEKRLSFCGS 172
RG+ LTVP KRLSFCGS
Sbjct: 157 RGITGRLTVPLKRLSFCGS 175
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 89 VNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
V V+Q ++ K + LE VELQI LK YD KD+ F GT++LK P P
Sbjct: 39 VREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIRLKSTPSP 86
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 410 PRLLGPGLNKAGKFPGLLSHQESM 481
P++L PGLNKAGKFP LL+H E+M
Sbjct: 110 PQILDPGLNKAGKFPSLLTHSENM 133
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/72 (31%), Positives = 45/72 (62%)
Frame = +2
Query: 83 ECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQ 262
E + ++ ++ E ++ ET+E+Q+ LK YD ++DK+F G+V L + R +V ++GD+
Sbjct: 7 EKLESICATAAEGAKRKDETMEVQVCLKGYDLKRDKKFDGSVVLPFQKRKNERVLVVGDR 66
Query: 263 QHCDEAKQLDVP 298
+ AK+ +P
Sbjct: 67 NLEEMAKEAGLP 78
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 45.6 bits (103), Expect = 6e-04
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Frame = +2
Query: 62 VSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQK-DKRFSGTVKLKY-IPRP- 232
V +D L + + I++ K KR+F+ETVE+ + L+N D +K + R V L + + +P
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 233 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIP 412
K+ V GD + DV + E D +A L+ +I
Sbjct: 61 KIGVFAKGDTALKAKEAGADV-VITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEIG 119
Query: 413 RLLGPGLNKAGKFP 454
R LGP L GK P
Sbjct: 120 RKLGPVLGPRGKIP 133
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Frame = +2
Query: 47 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQK-DKRFSGTVKLKYI 223
+K S+D+L E + + KR F ++VEL + K D +K + + V L
Sbjct: 1 MKNMLASKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKE 60
Query: 224 PRPKMQVCILGDQQHCDEAKQLDV-PCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 400
P +V ++ Q + AK+ + + E D L ++ +
Sbjct: 61 PSKPRKVLVIPAFQQIESAKKAEPNVLLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSM 120
Query: 401 KQIPRLLGPGLNKAGKFP 454
+ R+LGP L GKFP
Sbjct: 121 ALVGRILGPALGPRGKFP 138
>UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7;
Bacteria|Rep: 50S ribosomal protein L1 - Rickettsia
prowazekii
Length = 238
Score = 39.5 bits (88), Expect = 0.039
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Frame = +2
Query: 59 KVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQ-KDKRFSGTVKLKYIPRPK 235
KV DTLY NAV Q KF T+E+ + L DP+ D+ G V L
Sbjct: 22 KVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKL-GIDPRHSDQIVRGVVNLPAGTGKT 80
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASE---SLIKQ 406
++V ++ ++ +EAK + + FD C+A+ S+I
Sbjct: 81 IRVAVICKEEREEEAKSAGADLVGS------INIIDEIKAGQINFDVCIATPDMMSMISS 134
Query: 407 IPRLLGP 427
+ R+LGP
Sbjct: 135 VARILGP 141
>UniRef50_Q8TX51 Cluster: 50S ribosomal protein L1P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L1P -
Methanopyrus kandleri
Length = 214
Score = 39.5 bits (88), Expect = 0.039
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Frame = +2
Query: 62 VSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKM 238
++ + L E + V++ S R+FLETV++ + +K D +R V L + +
Sbjct: 3 ITEEDLIEPLRKVVEYSPP--RRFLETVDMIVNVKGVDLSDPSQRIDKEVVLPHGRGKPV 60
Query: 239 QVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRL 418
VC++ + + EA++ ++ E + A L+ + R+
Sbjct: 61 NVCVIAEGEMAREAEEAGATVINREKLEELAENVREAKKIARRHEFFYAQVDLMPDVGRV 120
Query: 419 LGPGLNKAGK 448
LGP L GK
Sbjct: 121 LGPVLGPRGK 130
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 38.7 bits (86), Expect = 0.068
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 59 KVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPK 235
KV+ D L + + + S+ EKKR F ETVE + L DP++ D+ G + L +
Sbjct: 181 KVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKT 238
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESL---IKQ 406
++V + + DEA+ + + FD C+A+ + +
Sbjct: 239 VRVAVFAEGPAADEARAAGADVVGGD----ELIEEIRTGGGKLSFDKCIATPMYMPRLSK 294
Query: 407 IPRLLGP 427
+ R+LGP
Sbjct: 295 VARILGP 301
>UniRef50_Q2FQ32 Cluster: Ribosomal protein L1; n=4;
Methanomicrobiales|Rep: Ribosomal protein L1 -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 215
Score = 38.7 bits (86), Expect = 0.068
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +2
Query: 101 IQSSKEK--KRKFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCILGDQQHC 271
++ +KE+ +RKF E+V++ I LKN D + K R T+ L + +++ +LG
Sbjct: 11 LKKAKEQAPERKFTESVDMTINLKNIDMSQPKNRIDETILLPHGNGRVVKIAVLGSGDIV 70
Query: 272 DEAKQLDVP-CMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKAGK 448
+A++ V M E LA ++ + R LGP L G+
Sbjct: 71 TQARESGVELIMGPEEIERLGGAPREARKIASEHQFFLAETQVMSLVGRWLGPRLGPRGR 130
Query: 449 FP 454
P
Sbjct: 131 MP 132
>UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L10A
- Encephalitozoon cuniculi
Length = 219
Score = 38.3 bits (85), Expect = 0.090
Identities = 16/70 (22%), Positives = 36/70 (51%)
Frame = +2
Query: 89 VNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQH 268
+ + Q + + + + T+++Q+ LK +DP+KD + S + L Y R + ++ D+ H
Sbjct: 19 IGIINQLKESEDPEKIVTIQIQVNLKGFDPRKDNKVSKDMVLPYRVRSLDKTIVIADEAH 78
Query: 269 CDEAKQLDVP 298
++P
Sbjct: 79 VKVCIDANLP 88
>UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8;
Alphaproteobacteria|Rep: 50S ribosomal protein L1 -
Rickettsia conorii
Length = 239
Score = 35.1 bits (77), Expect = 0.84
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 3/126 (2%)
Frame = +2
Query: 59 KVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 238
KV DTLY NAV + KF T+E+ + L D+ G V L +
Sbjct: 23 KVKSDTLYNLTNAVERLKSASYVKFDPTLEIVMKLGIDSRHSDQMVRGVVNLPAGTGKTV 82
Query: 239 QVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESL---IKQI 409
+V ++ ++ +EAK + + FD C+A+ + I +
Sbjct: 83 RVAVICKEEREEEAKSAGADLVGS------TNIIDEIKAGKINFDVCIATPDMMAAIGSV 136
Query: 410 PRLLGP 427
R+LGP
Sbjct: 137 ARILGP 142
>UniRef50_O67759 Cluster: 50S ribosomal protein L1; n=40;
Bacteria|Rep: 50S ribosomal protein L1 - Aquifex
aeolicus
Length = 242
Score = 33.5 bits (73), Expect = 2.6
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +2
Query: 35 GSWFIKMSKV----SRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQ-KDKRFS 199
G +I+ SK+ R TL E V+ + + + +R+F ETVEL + L N DP+ D+
Sbjct: 5 GKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRL-NVDPRYADQMVR 63
Query: 200 GTVKLKYIPRPKMQVCILGDQQHCDEAKQ 286
G+V L + ++V + + ++ +A++
Sbjct: 64 GSVVLPHGLGKPIKVVVFAEGEYAKKAEE 92
>UniRef50_Q88KW9 Cluster: Chorismate mutase family protein; n=2;
Pseudomonas putida|Rep: Chorismate mutase family protein
- Pseudomonas putida (strain KT2440)
Length = 232
Score = 33.1 bits (72), Expect = 3.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 161 LKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCDEAKQLDVPC 301
L+ Y P ++ KL PR C Q H E Q+DVPC
Sbjct: 89 LRRYTPSVEREADLAQKLHCTPRSPTTACSNQSQAHEKEVMQMDVPC 135
>UniRef50_Q8EX24 Cluster: 50S ribosomal protein L1; n=2;
Mycoplasma|Rep: 50S ribosomal protein L1 - Mycoplasma
penetrans
Length = 336
Score = 33.1 bits (72), Expect = 3.4
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 74 TLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCIL 253
T+ E VN Q+S K FL ++++ I L + D++ GTV L Y + ++ +L
Sbjct: 26 TIEEAVNLAKQTSNAK---FLSSIDIAIKLNLDTSKSDQQLRGTVSLPYFFGKEKRILVL 82
Query: 254 GDQQHCDEAKQLDV 295
+AK L V
Sbjct: 83 DKGLTQKDAKSLGV 96
>UniRef50_Q97E83 Cluster: Putative uncharacterized protein CAC3232;
n=1; Clostridium acetobutylicum|Rep: Putative
uncharacterized protein CAC3232 - Clostridium
acetobutylicum
Length = 145
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +2
Query: 98 VIQSSKEKKRKFL----ETVELQIGLKNYDPQKDKRFSGTVKLKYIP 226
+I+ +E+KR + + +++ LK Y +K++RF+ +V +KYIP
Sbjct: 20 LIKKEEEQKRHIMVLTRQNNKMKKALKGYSDKKEERFNNSVVIKYIP 66
>UniRef50_Q75WV2 Cluster: Putative uncharacterized protein HMA7;
n=1; Nicotiana tabacum|Rep: Putative uncharacterized
protein HMA7 - Nicotiana tabacum (Common tobacco)
Length = 789
Score = 32.3 bits (70), Expect = 5.9
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 39 VGS*KCLKYLVIRSMSALTQSSSLQKRRNVNF*KLLNC 152
+G K L+YL I S S +T +S+ K N+ KL+NC
Sbjct: 331 LGGLKHLRYLAISSRSIVTLPNSITKLHNLQVLKLVNC 368
>UniRef50_Q2Y4X8 Cluster: LSU ribosomal protein L1P; n=1; uncultured
archaeon|Rep: LSU ribosomal protein L1P - uncultured
archaeon
Length = 207
Score = 32.3 bits (70), Expect = 5.9
Identities = 28/124 (22%), Positives = 52/124 (41%)
Frame = +2
Query: 83 ECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQ 262
E + AV + K+R F+E+V+L I LKN D ++ K + ++++ +
Sbjct: 5 EMLEAVGKVLSSKERGFVESVDLSINLKNIDLKQPKNRINVDVVLPKKFKELKIGAIASG 64
Query: 263 QHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKA 442
+ +AK++ +D E D +A +L+ + + LG L
Sbjct: 65 EIAMKAKEVGAEVIDPEELKRMDKKKARALVNRC--DYFIAESALMALVGKSLGAILGPR 122
Query: 443 GKFP 454
GK P
Sbjct: 123 GKMP 126
>UniRef50_UPI000038D29C Cluster: COG2931: RTX toxins and related
Ca2+-binding proteins; n=2; Nostoc punctiforme PCC
73102|Rep: COG2931: RTX toxins and related Ca2+-binding
proteins - Nostoc punctiforme PCC 73102
Length = 2495
Score = 31.9 bits (69), Expect = 7.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 144 TVSKNLRFFSFEDWMTALTHS*SVSRDTLDIFMNQLPYTF 25
T N+ F D + A T S+ DTLD F NQ P+TF
Sbjct: 815 TELSNVEAILFSDELQASTQGISLLFDTLDDFGNQAPFTF 854
>UniRef50_A3BW74 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 176
Score = 31.9 bits (69), Expect = 7.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 253 ENAHLHLRTRDVLKLDGAGETLVLLRVIVLETD 155
E HL + + LDGAGE LVLLR +L+ D
Sbjct: 43 EGLHLDPKNDHLRALDGAGERLVLLRADLLDPD 75
>UniRef50_Q82DQ8 Cluster: 50S ribosomal protein L1; n=52;
Bacteria|Rep: 50S ribosomal protein L1 - Streptomyces
avermitilis
Length = 241
Score = 31.9 bits (69), Expect = 7.8
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRP 232
+K+ R+ LY + AV + + KF TVE+ L DP+K D+ GTV L +
Sbjct: 13 AKIDREKLYAPLEAVRLAKETSTSKFDGTVEVAFRL-GVDPRKADQMVRGTVNLPHGTGK 71
Query: 233 KMQVCIL--GDQQHCDEAKQLDV 295
+V + GD+ A D+
Sbjct: 72 TARVLVFATGDRAEAARAAGADI 94
>UniRef50_Q6A6K3 Cluster: 50S ribosomal protein L1; n=20;
Bacteria|Rep: 50S ribosomal protein L1 -
Propionibacterium acnes
Length = 232
Score = 31.9 bits (69), Expect = 7.8
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 59 KVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPK 235
KV+ D LY A+ + KF ETV++ I L DP+K D+ GTV L +
Sbjct: 13 KVNLDQLYSPEEALALVASGASAKFDETVDVAIRL-GVDPKKADQMVRGTVNLPHGTGKT 71
Query: 236 MQVCILGDQQHCDEAKQ 286
+V + + + A++
Sbjct: 72 TRVLVFATGEKAEAARE 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,721,978
Number of Sequences: 1657284
Number of extensions: 6021102
Number of successful extensions: 14258
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14238
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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