Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L14
(483 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 201 1e-51
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 200 2e-51
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 180 2e-45
X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID ... 29 6.5
U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55 pro... 29 6.5
BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,... 29 6.5
AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55 p... 29 6.5
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 201 bits (490), Expect = 1e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 200 bits (489), Expect = 2e-51
Identities = 95/142 (66%), Positives = 107/142 (75%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 236 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPR 415
VC+LGDQQHCDEAK +D+P MD E +DA LASESLIKQIPR
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLVKKYDAFLASESLIKQIPR 122
Query: 416 LLGPGLNKAGKFPGLLSHQESM 481
+LGPGLNKAGKFP LL+H E+M
Sbjct: 123 ILGPGLNKAGKFPSLLTHNENM 144
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 180 bits (439), Expect = 2e-45
Identities = 84/129 (65%), Positives = 97/129 (75%)
Frame = +2
Query: 95 AVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCD 274
+V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VC+LGDQQHCD
Sbjct: 5 SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 64
Query: 275 EAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLIKQIPRLLGPGLNKAGKFP 454
EAK +D+P MD E +DA LASESLIKQIPR+LGPGLNKAGKFP
Sbjct: 65 EAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFP 124
Query: 455 GLLSHQESM 481
LL+H E+M
Sbjct: 125 SLLTHNENM 133
>X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID
protein.
Length = 349
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 104 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 241
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 104 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 241
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 55kDa
protein.
Length = 349
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 104 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 241
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 104 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 241
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,466,078
Number of Sequences: 237096
Number of extensions: 939476
Number of successful extensions: 5259
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5250
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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