Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L13
(207 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 93 8e-19
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 93 8e-19
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 87 6e-17
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 85 3e-16
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 85 4e-16
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 84 5e-16
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 81 6e-15
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 75 4e-13
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 72 2e-12
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 72 2e-12
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 71 5e-12
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 71 7e-12
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 70 1e-11
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 70 1e-11
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 69 2e-11
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 69 3e-11
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 68 5e-11
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 65 3e-10
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 65 3e-10
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 62 2e-09
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 59 2e-08
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 58 3e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 56 2e-07
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 52 3e-06
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 50 8e-06
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 48 6e-05
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 47 7e-05
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 43 0.001
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 40 0.008
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 38 0.045
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 35 0.32
UniRef50_A5Z5Y7 Cluster: Putative uncharacterized protein; n=1; ... 31 3.9
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 31 5.1
UniRef50_A3DE10 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q8IBF2 Cluster: Putative uncharacterized protein MAL7P1... 31 5.1
UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=... 31 6.8
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 93.5 bits (222), Expect = 8e-19
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC SSG
Sbjct: 61 KTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSG 120
Query: 188 SIAR 199
+I+R
Sbjct: 121 AISR 124
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 93.5 bits (222), Expect = 8e-19
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC SSG
Sbjct: 41 KTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSG 100
Query: 188 SIAR 199
+I+R
Sbjct: 101 AISR 104
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 87.4 bits (207), Expect = 6e-17
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +2
Query: 14 ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV PSHF S S+
Sbjct: 40 AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Query: 194 ARK 202
AR+
Sbjct: 100 ARR 102
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 85.0 bits (201), Expect = 3e-16
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +2
Query: 23 KELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSIARK 202
KELAP D DW+YVR A++ R +YIRSP GV + +++G KR GVTP+HF +SGS+ RK
Sbjct: 44 KELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRK 103
Query: 203 A 205
A
Sbjct: 104 A 104
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 84.6 bits (200), Expect = 4e-16
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PSH SG
Sbjct: 38 KTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSG 97
Query: 188 SIARK 202
S+ RK
Sbjct: 98 SVQRK 102
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +2
Query: 26 ELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSIARKA 205
+LAPY+PDWFYVRCAAILRH+YIR P G+ + K F +KRNGV PSH + GS+ RKA
Sbjct: 44 QLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKA 102
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 80.6 bits (190), Expect = 6e-15
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 2 HEETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*S 181
+ +T+ KELAP DPDWFY+R AA+LRH+Y GV + K++ +KRNG P+H C +
Sbjct: 58 YAKTSVAKELAPQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRA 117
Query: 182 SGSIAR 199
SG I R
Sbjct: 118 SGKILR 123
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 74.5 bits (175), Expect = 4e-13
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T+ KELAP DP WFY+R AAILRH+Y G+ + +++ RKR G P+H C +SG
Sbjct: 60 KTSCAKELAPQDPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASG 119
Query: 188 SIAR 199
I R
Sbjct: 120 KIIR 123
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA +ELAPYDPDW Y+R A+I R +YIR +G KI+G RKR G+ P SSG
Sbjct: 45 KTAASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSG 104
Query: 188 SIAR 199
+ R
Sbjct: 105 GLIR 108
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 72.1 bits (169), Expect = 2e-12
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA FKE +P DPDW+Y+R A+I R +Y+R GV ++ K++GG R GV HF +SG
Sbjct: 47 KTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASG 106
Query: 188 SIAR 199
+ R
Sbjct: 107 GLIR 110
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 70.9 bits (166), Expect = 5e-12
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA ++EL P +PDW Y R A + R +YIR GV T ++FGG +RNGV P+HF +G
Sbjct: 40 KTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNG 99
Query: 188 SIAR 199
R
Sbjct: 100 GNIR 103
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 70.5 bits (165), Expect = 7e-12
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T R KE P DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G P F SG
Sbjct: 36 KTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSG 95
Query: 188 SIARK 202
+I RK
Sbjct: 96 AIIRK 100
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 69.7 bits (163), Expect = 1e-11
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T+ EL P D DW+YVR AA+ RHIY+R VGV + K+ G K G P+H +SG
Sbjct: 112 KTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASG 171
Query: 188 SIARK 202
S+ RK
Sbjct: 172 SVDRK 176
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KE+ P DPDW++ R AA+LR +Y+ P+GV+ + +GG K G P+ F SG
Sbjct: 36 KTGVHKEMPPEDPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSG 95
Query: 188 SIARKA 205
S+ RKA
Sbjct: 96 SVLRKA 101
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +2
Query: 2 HEETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*S 181
H +TA KEL P + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H +
Sbjct: 49 HVKTASSKELPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVA 108
Query: 182 SGSIAR 199
S I R
Sbjct: 109 SRGIIR 114
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 68.5 bits (160), Expect = 3e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T R KE P DW+Y R A+ILR +YI PVG++ + +GGRK G P F + G
Sbjct: 36 KTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGG 95
Query: 188 SIARKA 205
SI RKA
Sbjct: 96 SIIRKA 101
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KE P +PDW+YVR AA+LR +YI PVGV ++ +GG+K G P F SG
Sbjct: 36 KTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSG 95
Query: 188 SIARKA 205
+I R+A
Sbjct: 96 AIIRRA 101
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 65.3 bits (152), Expect = 3e-10
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFC*SS 184
+T KE P D DW+YVR A+ILR +Y P+G++T I+GGR+ G P HF +
Sbjct: 37 KTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAG 96
Query: 185 GSIARK 202
GS+ RK
Sbjct: 97 GSVPRK 102
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 64.9 bits (151), Expect = 3e-10
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KE +P DW+Y+R A+I R +YI PVG++ + +GGRKR G P F SG
Sbjct: 34 KTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSG 93
Query: 188 SIARKA 205
+I R A
Sbjct: 94 AIVRNA 99
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 23 KELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SS 184
+E AP +PDW+Y+RCAA+LR IY+R VG ++K FG +K G P H SS
Sbjct: 68 RERAPQNPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSS 121
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 59.3 bits (137), Expect = 2e-08
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T + ++LAP D DW++++ ++ILR +YI +GV + + F ++R GV P+H +SG
Sbjct: 82 KTGKGRKLAPLDEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASG 141
Query: 188 SIAR 199
I R
Sbjct: 142 KILR 145
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KELAP +PDW Y+R AAI R +Y+ + +GV + + +G + PSH SG
Sbjct: 39 KTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSG 98
Query: 188 SIAR 199
+ R
Sbjct: 99 KVNR 102
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T + P + DW++ RCA+I+R IY+ P+G+ + K +GG K +G +H + G
Sbjct: 35 KTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGG 94
Query: 188 SIARKA 205
+I R A
Sbjct: 95 AIIRNA 100
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 52.0 bits (119), Expect = 3e-06
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 11 TARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNG 154
T+ +ELAP D DW Y+R AA+ R +Y++ G+ T+ IFG K G
Sbjct: 43 TSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRG 90
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 50.4 bits (115), Expect = 8e-06
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNG 154
+T KE +P D DW YVR AA+ R IY+R GV +T +FG NG
Sbjct: 90 KTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNG 138
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 47.6 bits (108), Expect = 6e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 35 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSIARKA 205
P D W++ RCA+++R IY+ P+G+ + +GG K G ++ + G+I R A
Sbjct: 38 PQDRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNA 94
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 47.2 bits (107), Expect = 7e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T KE P DW YVR A++LR +YI +G+ ++ +GG+ G H S
Sbjct: 36 KTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSR 95
Query: 188 SIAR 199
SI R
Sbjct: 96 SITR 99
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA K+LAP + +W+Y+R AA+ R IY+ + + +G + P H +S
Sbjct: 45 KTASLKQLAPANNNWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASR 104
Query: 188 SIAR 199
+ R
Sbjct: 105 KVIR 108
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 40.3 bits (90), Expect = 0.008
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 23 KELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKR 148
KEL P D++YVR A++LR + P+G++ + +G +KR
Sbjct: 51 KELPPEQEDFWYVRSASLLRKVAQNEPIGIERLATEYGSKKR 92
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 37.9 bits (84), Expect = 0.045
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 14 ARFKELAPYDPDWFYVRCAAILRH 85
A+ KELAPY+ +WFY R A+ RH
Sbjct: 185 AKHKELAPYEENWFYTRAASTARH 208
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 35.1 bits (77), Expect = 0.32
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKR 148
+++ K+ +P +W + R A+I+ YI +G + + +I+ G+K+
Sbjct: 37 KSSSLKKYSPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKK 83
>UniRef50_A5Z5Y7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 517
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 199 TSNTAR*SAEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKPIRVIG 35
T ++ R S DTI + S + + DIDV QY T I P G
Sbjct: 206 TDDSKRSSVSTTNVDTIVYKVVTEASQMATAIQTGDIDVAQYMDTTAIDPFYANG 260
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 137 GRKRNGVTPSHFC*SSGSIARK 202
GR+RNGV PSHF S ++AR+
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARR 98
>UniRef50_A3DE10 Cluster: Putative uncharacterized protein; n=1;
Clostridium thermocellum ATCC 27405|Rep: Putative
uncharacterized protein - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 136
Score = 31.1 bits (67), Expect = 5.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 9 RQLVSRNWLPMTLIGFMYAVLLYCVTSI 92
+ + S+ WL ++GF+Y ++LY V+SI
Sbjct: 75 KNVKSKGWLNGAIVGFIYMLILYLVSSI 102
>UniRef50_Q8IBF2 Cluster: Putative uncharacterized protein
MAL7P1.171; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.171 - Plasmodium
falciparum (isolate 3D7)
Length = 2110
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 163 GCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKPIR 44
G + +ATTKNF NSN I+ Y++ +Y+ +
Sbjct: 427 GVNNTTYATTKNFVSEFNSNYDDGINKGSYTTKSYVSEFK 466
>UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=6;
Trypanosomatidae|Rep: DNA primase small subunit,
putative - Leishmania major
Length = 451
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 50 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRK 145
W ++ CAA + H +R G K + +F GR+
Sbjct: 190 WAWMSCAAHVLHTVLRDDFGFKYILPVFSGRR 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,480,999
Number of Sequences: 1657284
Number of extensions: 2809205
Number of successful extensions: 7372
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7368
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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