Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L13
         (207 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    22   2.3  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    20   9.2  

>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 17  RFKELAPYDPDWFYV 61
           RF+++A   PDW +V
Sbjct: 166 RFRDVASEHPDWAFV 180


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 2   HEETARFKELAPYDPD 49
           H+ T   +EL+P +PD
Sbjct: 342 HDNTQYDEELSPQNPD 357


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,720
Number of Sequences: 2352
Number of extensions: 3322
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 46
effective length of database: 455,787
effective search space used: 10027314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)