Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L13
         (207 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...    87   7e-18
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...    87   7e-18
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...    87   7e-18
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...    87   7e-18
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...    87   7e-18
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...    87   7e-18
BC132743-1|AAI32744.1|  473|Homo sapiens potassium channel tetra...    27   8.3  
AK123347-1|BAC85588.1|  473|Homo sapiens protein ( Homo sapiens ...    27   8.3  

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 40  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99

Query: 194 ARK 202
           AR+
Sbjct: 100 ARR 102


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 40  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99

Query: 194 ARK 202
           AR+
Sbjct: 100 ARR 102


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 52  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 111

Query: 194 ARK 202
           AR+
Sbjct: 112 ARR 114


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 40  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99

Query: 194 ARK 202
           AR+
Sbjct: 100 ARR 102


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 40  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99

Query: 194 ARK 202
           AR+
Sbjct: 100 ARR 102


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 14  ARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSGSI 193
           A+ KELAPYD +WFY R A+  RH+Y+R   GV ++TKI+GGR+RNGV PSHF   S S+
Sbjct: 40  AKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99

Query: 194 ARK 202
           AR+
Sbjct: 100 ARR 102


>BC132743-1|AAI32744.1|  473|Homo sapiens potassium channel
           tetramerisation domain containing 8 protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 175 AEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIK 53
           A +  C  IA A  + F D+LN +R  D    +Y+S  Y+K
Sbjct: 233 ARIMVCGRIALAK-EVFGDTLNESRDPDRQPEKYTSRFYLK 272


>AK123347-1|BAC85588.1|  473|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41353 fis, clone BRAWH2014662. ).
          Length = 473

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 175 AEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIK 53
           A +  C  IA A  + F D+LN +R  D    +Y+S  Y+K
Sbjct: 233 ARIMVCGRIALAK-EVFGDTLNESRDPDRQPEKYTSRFYLK 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,378,321
Number of Sequences: 237096
Number of extensions: 462223
Number of successful extensions: 816
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)