Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L13
(207 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 115 8e-27
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 115 8e-27
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 115 8e-27
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 115 8e-27
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 115 8e-27
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 115 8e-27
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 94 2e-20
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 94 2e-20
BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro... 26 8.3
AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p pro... 26 8.3
AY051885-1|AAK93309.1| 731|Drosophila melanogaster LD37351p pro... 26 8.3
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD... 26 8.3
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA... 26 8.3
AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA ... 26 8.3
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 115 bits (277), Expect = 8e-27
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+TA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFC ++
Sbjct: 38 KTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAAD 97
Query: 188 SIARKA 205
ARKA
Sbjct: 98 GAARKA 103
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 94.3 bits (224), Expect = 2e-20
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T +FKE AP D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV PS C SS
Sbjct: 38 KTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSD 97
Query: 188 SIARKA 205
RKA
Sbjct: 98 GCIRKA 103
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 94.3 bits (224), Expect = 2e-20
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +2
Query: 8 ETARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC*SSG 187
+T +FKE AP D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV PS C SS
Sbjct: 38 KTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSD 97
Query: 188 SIARKA 205
RKA
Sbjct: 98 GCIRKA 103
>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
protein.
Length = 1199
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 151 IAFATTKNFSDSLNSNRRADIDVTQYSST 65
I T++ L N +ADIDV +SST
Sbjct: 678 ITSVTSEASKKELQENNQADIDVAAFSST 706
>AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p
protein.
Length = 1057
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 206 ELYEQYCQMISRSERV*HHCVCDHQKF 126
+LY YCQ I RSE++ V H F
Sbjct: 707 QLYSFYCQNIQRSEKLRETLVDTHMFF 733
>AY051885-1|AAK93309.1| 731|Drosophila melanogaster LD37351p
protein.
Length = 731
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 151 IAFATTKNFSDSLNSNRRADIDVTQYSST 65
I T++ L N +ADIDV +SST
Sbjct: 210 ITSVTSEASKKELQENNQADIDVAAFSST 238
>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
isoform D protein.
Length = 3651
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -3
Query: 178 SAEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKPI 47
S E +G + + T N+S ++ S+ + T++SST+ P+
Sbjct: 2904 SQEAKGYKYTSSSMTSNYSHNMQSSSSSSHHETKFSSTSAPPPV 2947
>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
isoform A protein.
Length = 1199
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 151 IAFATTKNFSDSLNSNRRADIDVTQYSST 65
I T++ L N +ADIDV +SST
Sbjct: 678 ITSVTSEASKKELQENNQADIDVAAFSST 706
>AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA
protein.
Length = 1057
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 206 ELYEQYCQMISRSERV*HHCVCDHQKF 126
+LY YCQ I RSE++ V H F
Sbjct: 707 QLYSFYCQNIQRSEKLRETLVDTHMFF 733
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,794,874
Number of Sequences: 53049
Number of extensions: 141038
Number of successful extensions: 263
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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