Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L13
         (207 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   6.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   6.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   8.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   8.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    19   8.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   8.2  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     19   8.2  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 5   EETARFKELAPYDPDWFY 58
           E+ AR +      P WFY
Sbjct: 422 EKAARMQAKVNRQPVWFY 439


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 5   EETARFKELAPYDPDWFY 58
           E+ AR +      P WFY
Sbjct: 422 EKAARMQAKVNRQPVWFY 439


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 127 NFWWSQTQWCHTLS 168
           N++    QW HT+S
Sbjct: 7   NYYGDVYQWNHTVS 20


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 7/24 (29%), Positives = 10/24 (41%)
 Frame = +1

Query: 127 NFWWSQTQWCHTLSLLLIIWQYCS 198
           N W   T WC     L +++   S
Sbjct: 110 NRWLFTTDWCDVWRSLDVLFSTAS 133


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 35  PYDPDWFYVRCA 70
           P +PD F V CA
Sbjct: 415 PANPDIFRVSCA 426


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  LVSRNWLPM 41
           L+ +NWLP+
Sbjct: 433 LLEKNWLPV 441


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 35  PYDPDWFYVRCA 70
           P +PD F V CA
Sbjct: 121 PANPDIFRVSCA 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,995
Number of Sequences: 438
Number of extensions: 787
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)