Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L11
(441 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 222 3e-57
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 215 5e-55
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 196 2e-49
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 181 5e-45
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 159 2e-38
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 156 2e-37
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 143 1e-33
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 126 7e-32
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 135 3e-31
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 132 4e-30
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 124 1e-27
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 117 1e-25
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 111 6e-24
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 94 1e-18
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 93 2e-18
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 89 4e-17
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 87 1e-16
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 87 2e-16
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 85 5e-16
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 81 1e-14
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 76 3e-13
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 76 4e-13
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 73 4e-12
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 72 5e-12
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 72 5e-12
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 72 6e-12
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 71 1e-11
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 69 3e-11
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 66 4e-10
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 64 1e-09
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 62 7e-09
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 62 7e-09
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 60 2e-08
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 50 2e-05
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 50 2e-05
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 49 4e-05
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 46 4e-04
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 44 0.001
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 44 0.001
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 42 0.006
UniRef50_A5DK17 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 42 0.006
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 41 0.014
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 41 0.014
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 40 0.018
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 40 0.018
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 40 0.024
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 40 0.031
UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13; ... 39 0.055
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 38 0.072
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 38 0.096
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 38 0.096
UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycopla... 38 0.13
UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7; Chlamyd... 36 0.39
UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265; Bacte... 36 0.51
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 35 0.89
UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast ... 35 0.89
UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candida... 34 1.6
UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borreli... 34 1.6
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1; Tr... 33 2.1
UniRef50_Q6CPB8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 2.1
UniRef50_A7I6P7 Cluster: Molybdenum ABC transporter, periplasmic... 33 2.7
UniRef50_Q45461 Cluster: Choline transport system permease prote... 33 2.7
UniRef50_Q1CZA2 Cluster: Putative membrane protein; n=1; Myxococ... 33 3.6
UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6; Bacteri... 33 3.6
UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2; Bacteri... 32 4.7
UniRef50_Q4JTD5 Cluster: 50S ribosomal protein L13; n=1; Coryneb... 32 4.7
UniRef50_Q8VNR5 Cluster: Ent protein; n=4; Escherichia coli|Rep:... 32 6.3
UniRef50_Q00XR1 Cluster: Chromosome 12 contig 1, DNA sequence; n... 32 6.3
UniRef50_A7H7V3 Cluster: Putative uncharacterized protein; n=2; ... 31 8.3
UniRef50_A3EQS3 Cluster: 50S ribosomal protein L13; n=1; Leptosp... 31 8.3
UniRef50_A0NPD7 Cluster: Sensory box/GGDEF domain/EAL domain pro... 31 8.3
UniRef50_Q4XST6 Cluster: Arsenical pump-driving ATPase, putative... 31 8.3
UniRef50_A7EPQ6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129; Bacte... 31 8.3
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 222 bits (542), Expect = 3e-57
Identities = 95/143 (66%), Positives = 116/143 (81%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FFRNK+KF+++LRKRCNV
Sbjct: 7 KPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNV 66
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NPARGPFHFRAPS++LWK VRGM+PHKT+RG NAL+RL+ Y+G P PFD
Sbjct: 67 NPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVPTAM 126
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
CL+P RK+C VGR++HEVGW
Sbjct: 127 RQLCLRPDRKFCDVGRVAHEVGW 149
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 215 bits (524), Expect = 5e-55
Identities = 93/143 (65%), Positives = 115/143 (80%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+KF+++LRKRCNV
Sbjct: 7 RTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNV 66
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NPARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 67 NPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAM 126
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
L+ RKYC+VGRLSHEVGW
Sbjct: 127 RVLTLRSDRKYCQVGRLSHEVGW 149
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 196 bits (477), Expect = 2e-49
Identities = 87/143 (60%), Positives = 107/143 (74%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ FRNKLKF +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NP RGPFHFR+P++ILW+T+RGMIPHKT RG AL RL+ ++G PPP+D
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
LKPGRK+C +GRL+ EVGW
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGW 146
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 181 bits (441), Expect = 5e-45
Identities = 79/143 (55%), Positives = 102/143 (71%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
+ IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG R K+K++ FLRKR N
Sbjct: 10 RRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNT 69
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
P+ GP HFRAPSKILW+T+RGMIPHKT+RG AL RL+ Y+G PPP+D
Sbjct: 70 KPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIPDAL 129
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
L+ G KYC +G+LS EVGW
Sbjct: 130 KVLRLQAGHKYCLLGKLSSEVGW 152
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 159 bits (386), Expect = 2e-38
Identities = 74/143 (51%), Positives = 94/143 (65%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ FRN++KF FL K N
Sbjct: 76 KLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMNH 135
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NP RG HFRAPS+I W+ VRGM+PHKT +G AL RL+ ++G P P+D
Sbjct: 136 NPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQVVVDAL 195
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
L+ R C++G LS VGW
Sbjct: 196 KVQRLRNSRPVCKLGDLSASVGW 218
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 156 bits (378), Expect = 2e-37
Identities = 71/141 (50%), Positives = 96/141 (68%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K ++ + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 376
RGPFHFRAP++I+ +T+RGMIP+KT RG +A+ RLR YDG PP
Sbjct: 64 LRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAY 123
Query: 377 FCLKPGRKYCRVGRLSHEVGW 439
CL+P R+ C VGR++HE+GW
Sbjct: 124 LCLRPERRRCEVGRVAHEIGW 144
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 143 bits (347), Expect = 1e-33
Identities = 62/143 (43%), Positives = 87/143 (60%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K IVID +GHL GRLA++++K LL+G VVVVR E I +SG R ++ + KR N
Sbjct: 3 KVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNT 62
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NP +GP+H+ +PS++ WKTVRGM+PHKT RG A R + Y+G P P+D
Sbjct: 63 NPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEAL 122
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
L G ++C +G ++GW
Sbjct: 123 KVLRLGEGHRFCVLGDFCEQIGW 145
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 126 bits (303), Expect(2) = 7e-32
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = +2
Query: 2 ARGKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKR 181
A G+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+RNKLK+++FL K+
Sbjct: 2 AEGQVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQ 60
Query: 182 CNVNPARGPFHFRAPSKILWKTVRGMIPHKT 274
N NP+RGP+ F+APS+I W T RGM+PHKT
Sbjct: 61 MNTNPSRGPYRFQAPSRIFWWTARGMLPHKT 91
Score = 33.1 bits (72), Expect(2) = 7e-32
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 383 LKPGRKYCRVGRLSHEVGW 439
LKP RK+ +GRL+H+VGW
Sbjct: 98 LKPTRKFAYLGRLAHKVGW 116
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 135 bits (327), Expect = 3e-31
Identities = 67/146 (45%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Frame = +2
Query: 5 RGKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRC 184
R + IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G RNK+K++ +LRKR
Sbjct: 21 RPEIIVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRK 80
Query: 185 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP-PFDNXXXXXXX 361
NP +GPFH RAPS + +TVR M+P T+RG AL L Y+G PP
Sbjct: 81 LTNPTKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIP 140
Query: 362 XXXXXFCLKPGRKYCRVGRLSHEVGW 439
C + R Y +G + VGW
Sbjct: 141 RAQRHVCYRSERPYTVLGNMCKHVGW 166
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 132 bits (318), Expect = 4e-30
Identities = 58/143 (40%), Positives = 90/143 (62%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G RN K+ S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NP RGPFHF++PSKIL++T++ MIPHKT RG AL+ L+ ++G P F
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAF 121
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
+K RK +G++ +GW
Sbjct: 122 RYKVIKNYRKTVNLGKVCEVLGW 144
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 124 bits (298), Expect = 1e-27
Identities = 62/141 (43%), Positives = 82/141 (58%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G + FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 376
GPFH RAP +I + VRGMIP+KT RG +A L+ Y+G P + +
Sbjct: 65 RDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHALRC 124
Query: 377 FCLKPGRKYCRVGRLSHEVGW 439
+ R ++GRLS +GW
Sbjct: 125 VSIHTDRPTTKLGRLSTTMGW 145
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 117 bits (282), Expect = 1e-25
Identities = 62/141 (43%), Positives = 80/141 (56%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
+V+D R H+L RLA++IAK LL G +VV R N P
Sbjct: 12 VVVDARHHMLSRLASIIAKELLNGKRVV--------------------------RMNTKP 45
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 376
+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 46 SHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPDALKV 105
Query: 377 FCLKPGRKYCRVGRLSHEVGW 439
L+PG KYC +G+LS EVGW
Sbjct: 106 LRLQPGHKYCLLGQLSKEVGW 126
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 111 bits (267), Expect = 6e-24
Identities = 59/141 (41%), Positives = 77/141 (54%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
++ID G + G+LAA +AK+LLEG +V VV E+ G+ R KF +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 376
RGPFHFR P L K +R MI +K RGK A+ RL TY+G P +
Sbjct: 67 RRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVK 126
Query: 377 FCLKPGRKYCRVGRLSHEVGW 439
+ P R Y +G+L GW
Sbjct: 127 YTGNPNR-YVTLGKLLSMFGW 146
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 93.9 bits (223), Expect = 1e-18
Identities = 48/140 (34%), Positives = 72/140 (51%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 199
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG ++ FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 200 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 379
GP+H R P I+ + +RGM+P K GK A RLR Y G P +
Sbjct: 61 HGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAE--- 117
Query: 380 CLKPGRKYCRVGRLSHEVGW 439
+P Y + L VGW
Sbjct: 118 ITRPTANYTTMADLGETVGW 137
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 93.1 bits (221), Expect = 2e-18
Identities = 52/139 (37%), Positives = 78/139 (56%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 199
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN K+ R NP
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62
Query: 200 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 379
RGPF+ + +I+ +T+RGM+P KT+RG+ A RRL+ Y G P F +
Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSR 122
Query: 380 CLKPGRKYCRVGRLSHEVG 436
+P KY VG ++ +G
Sbjct: 123 LSRP--KYVTVGEVAKFLG 139
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 89.0 bits (211), Expect = 4e-17
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
+ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG ++ FL +
Sbjct: 12 RPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSII 71
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 367
NP GP H+R P I+ K +R M+P+ + GK +++RLR Y G P +
Sbjct: 72 NPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKA 131
Query: 368 XXXFCLKPGRKYCRVGRLSHEVGW 439
K Y +G L +GW
Sbjct: 132 KIK---KSPSNYTTMGELCRVIGW 152
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 87.4 bits (207), Expect = 1e-16
Identities = 47/112 (41%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMS-FLRKRCN 187
+AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G R K++ ++ +
Sbjct: 6 EAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTY 65
Query: 188 VNP-ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 340
NP RGP + + P ++ + VRGM+P + G+++L+RL Y G P + N
Sbjct: 66 YNPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 86.6 bits (205), Expect = 2e-16
Identities = 50/140 (35%), Positives = 76/140 (54%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 199
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G +N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 200 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 379
+GPF+ R P I + VRGM+P KT+RG+ A +RLR Y G P +
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADM 133
Query: 380 CLKPGRKYCRVGRLSHEVGW 439
Y +G LS E+G+
Sbjct: 134 SRLGHLWYVTLGELSEELGY 153
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 85.4 bits (202), Expect = 5e-16
Identities = 44/102 (43%), Positives = 65/102 (63%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 199
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + F + K +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKE 74
Query: 200 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
+GP+ R P +I +TVRGM+P K+ RG++A RRLR + G P
Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 80.6 bits (190), Expect = 1e-14
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K VID GH+LGR+A+V+AK LL G K+V+VRCE + + G +++ + RKR N
Sbjct: 10 KVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNT 69
Query: 191 NPARGPFHFRAPSKILWK 244
NP RG FH R+P++++ K
Sbjct: 70 NPTRGAFHHRSPAEMVRK 87
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 76.2 bits (179), Expect = 3e-13
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 376
GP+ + P +IL +T+RGM+P+K RG++A+ RL+ Y G P++
Sbjct: 60 EFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADAD 117
Query: 377 FCLKPGRKYCRVGRLSHEVG 436
L KY +G +S ++G
Sbjct: 118 MRLLSSNKYVELGEVSQKMG 137
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 75.8 bits (178), Expect = 4e-13
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGNFFRNKLKFMSFLRK---- 178
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 179 RCNVNPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
R + NP + GP R P ++ + VRGM+P K+E G++AL+RLR Y P
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 72.5 bits (170), Expect = 4e-12
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKF-MSFLRKRCN 187
+ IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ + + L + +
Sbjct: 9 REIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTVLGVKSH 68
Query: 188 VNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 367
+ P R P ++ VRGM+P RG+ AL RLR Y G P D
Sbjct: 69 FSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRF 125
Query: 368 XXXFCLKPGRKYCRVGRLSHEVGW 439
+ Y +G ++ ++GW
Sbjct: 126 PEADASRLSSHYIELGAVARQLGW 149
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 72.1 bits (169), Expect = 5e-12
Identities = 39/143 (27%), Positives = 68/143 (47%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
K IVIDGR L+GRLA+ I +L +G + V+RC+ + SG + + + +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 191 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
NP +GP+ F PS +L K V+GM+ + + + ++ P +
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGMLNKLNKSHTLLFKSVECFNDTPNRYIYNYKLFLKNSH 122
Query: 371 XXFCLKPGRKYCRVGRLSHEVGW 439
+ LKP K+ ++ + + GW
Sbjct: 123 KNYKLKPDSKFTKLYEILPKFGW 145
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 72.1 bits (169), Expect = 5e-12
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
+V+D R +LGR+++ +A+ +L+G V VV E+ I+GN + M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN----EEATMETYHTRAELGS 65
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
GP++ + P +I + +RGM+P+KTE G+ AL +R Y G P
Sbjct: 66 DSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 71.7 bits (168), Expect = 6e-12
Identities = 37/103 (35%), Positives = 63/103 (61%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
++ D G +LGRLA+++A+ L G +V +V E+ I+G+ N +K +L+K +
Sbjct: 7 LIYDAEGLVLGRLASIVARNLKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDY 63
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
+GPF+ + P IL + +RGM+P KT RG+ L+ ++ Y G P
Sbjct: 64 YKGPFYPKRPDNILKRVIRGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 70.5 bits (165), Expect = 1e-11
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
+ ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG R + L +
Sbjct: 8 QVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLF 67
Query: 191 NPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 367
NP R G R+P I+ +T+RGM+P K+ +G+ L+ ++ Y G P F+
Sbjct: 68 NPYRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS 126
Query: 368 XXXFCLKPGRKYCRVGRLSHEVGW 439
+ KY V +S E+GW
Sbjct: 127 DVS---RLKGKYVTVEVVSKELGW 147
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 69.3 bits (162), Expect = 3e-11
Identities = 34/103 (33%), Positives = 59/103 (57%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + + + KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGN 65
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
G F+ + P I +T+RGM+PHK +RG+ A +R Y G P
Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 65.7 bits (153), Expect = 4e-10
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K++ ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 197 AR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
+ GP + R P I+ + +RGM+P+K RG A ++++ G P
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +2
Query: 41 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHF 217
+LGRLA+++AK L + +VRCE+I ISG R K+K+M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
Score = 33.5 bits (73), Expect = 2.1
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +3
Query: 171 FVKDVMSTQPVD-LFTSELHQKSSGRPSEE*SHIRLSVGRMH*GGYVHMMVVHHRSTTGV 347
F++ M+T+P T LH +S G E H R SV R+H G +M H T
Sbjct: 43 FLRRRMNTKPSHGPITFVLHPRSFGALFVEWFHTRPSVARLHLLGCKYMREFLHHMTRSK 102
Query: 348 VS*YLQHYVYSV*SLAVNTVVWDVSRTKSDG 440
YL H Y A NT + DG
Sbjct: 103 GWWYLMHLRYCGFQRATNTACLGSYHLRWDG 133
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 61.7 bits (143), Expect = 7e-09
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
+++D +LGR++ IAK+L G KV VV E+ ISG R + + NP
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67
Query: 197 AR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
R G R P I+ +TVRGM+P K + GK R L+ Y G P
Sbjct: 68 YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 61.7 bits (143), Expect = 7e-09
Identities = 32/108 (29%), Positives = 54/108 (50%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 196
I ID H+ GRL++ +AK LL G + +V ++ I+G R + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG---RKEFIIDKFNNLRNTGSI 58
Query: 197 ARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 340
+GP++ + +IL +++ M+P K G AL+R Y P +N
Sbjct: 59 RKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 60.5 bits (140), Expect = 2e-08
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Frame = +2
Query: 2 ARGKAIVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVRCEQINISGNFFRNKLKFM 163
A +V D +LGRLA+ IAK LL EG+ +V+++ E ++G K + +
Sbjct: 2 AEADTLVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP----KDRIL 57
Query: 164 SFLRKRCNVN-PARGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYDGCP 325
+ ++ +N P +GPF R P IL +TVRGM+P+ K G+ A++ LR G P
Sbjct: 58 ADYDRKYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQAVKDLRVMIGTP 113
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 278 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRKYCRVGRLSHE 430
RG+ AL RL+ Y+G PPP+D L+PG KYC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 50.0 bits (114), Expect = 2e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 380 CLKPGRKYCRVGRLSHEVGW 439
CLKPGRKYC VGRLSHEVGW
Sbjct: 4 CLKPGRKYCHVGRLSHEVGW 23
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 49.2 bits (112), Expect = 4e-05
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGN------------KVVVVRCEQINISGNFFRNKLKF 160
+VID G LGRL+ V A L GN VVV+ ++I ++GN KL +
Sbjct: 75 VVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQKLYY 134
Query: 161 MSFLRKR--CNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
+R + H R P++++ K ++GM+P K G+ L+ Y G P
Sbjct: 135 TLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLP-KNRMGRETFTHLKVYAGADHP 192
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 46.0 bits (104), Expect = 4e-04
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKLKFM 163
++D LGRLA +A VL NK VVVV ++I +SGN KL
Sbjct: 18 LVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRR 77
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
R R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 78 HSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNA-LGRQLFRKLKVYRGPEHP 132
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 44.4 bits (100), Expect = 0.001
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 163
V+D LGRLA +A +L G+ VVVV E+I +SG + KL
Sbjct: 18 VVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQKLYRR 77
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
R R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 78 HSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 44.0 bits (99), Expect = 0.001
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISG-----NF 139
K VID G LGRLAA I+++L NK VVVV +++ ++G
Sbjct: 14 KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73
Query: 140 FRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
+R + LR+R R + P +IL + VRGM+P KT + L++LR Y G
Sbjct: 74 YRWHTGYPGGLRERSYRQMLR-----KRPEEILRQAVRGMMP-KTRLARRQLKKLRIYAG 127
Query: 320 CPPP 331
P
Sbjct: 128 PEHP 131
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 41.9 bits (94), Expect = 0.006
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 163
VID G LGR+A IAK L+ G+ V+V+ +++ ISG F K F
Sbjct: 73 VIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQKEYFR 132
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
R + R P +I+ K V+GM+P K G+ R L+ + G
Sbjct: 133 HSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP-KGPLGREQFRHLKVFAG 183
>UniRef50_A5DK17 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 209
Score = 41.9 bits (94), Expect = 0.006
Identities = 36/139 (25%), Positives = 69/139 (49%)
Frame = -3
Query: 439 PSDFVRETSHTTVFTARLQTEYT*CCRYYDTTPVVERWWTTIICT*PPQCILPTLSLMWD 260
P++ R+ ++ V + LQ++++ ++ +V W T Q L + L+ +
Sbjct: 65 PANSRRQLTNGGVLSTLLQSQHSQSLWNNNSLLLVVWWRNTFKDLESLQSSLTSSGLVRN 124
Query: 259 HSSDGLPEDF*WSSEVKRSTGWVDITSFTKE*HKLQFVPEEIAGNVNLFTTNDHNFVSFQ 80
H+S L E+ SSEV+ + G V + ++ LQ V E+ +V +++ +F++ Q
Sbjct: 125 HTSHSLVENSRRSSEVEWTLGLVVSGTLSQVVVVLQLVSEKFTTDVQGLGSDNDDFLAVQ 184
Query: 79 QDLSNYCGQSTEQVPAPVD 23
L N Q+T+QV VD
Sbjct: 185 NLLGNDGSQATQQVALTVD 203
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 41.9 bits (94), Expect = 0.006
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNK- 151
K ++ID +LGRLAA +A L +G+ V+V+ ++I+++G + +K
Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTGKKYTDKK 73
Query: 152 ----LKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
++ ++KR AR R P +++ K V MIP + G+ L+ LR Y G
Sbjct: 74 YYWHTGYIGGIKKR----TARQILEGRFPERVVEKAVERMIP-RGPLGRRQLKNLRVYAG 128
Query: 320 CPPP 331
P
Sbjct: 129 SQHP 132
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 40.7 bits (91), Expect = 0.014
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKL 154
K ++D LGRL+AV+A VL NK V+V+ E++ ++G NK+
Sbjct: 16 KWYIVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKAANKI 75
Query: 155 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
+ + + G + +++ K+V+GM+PH T G+ +L+ + G
Sbjct: 76 YYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNT-LGRAQGMKLKVFVG 129
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 40.7 bits (91), Expect = 0.014
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFRNKL 154
K V+D G LGRLA+ +A +L G+ V++V E+I ++G +K+
Sbjct: 15 KWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKV 74
Query: 155 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
+ R P ++L ++GM+PH G+ R+L+ Y G P
Sbjct: 75 YYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPH-NRLGRQMYRKLKVYAGPEHP 132
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 40.3 bits (90), Expect = 0.018
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 161 MSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYD 316
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ +D
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFD 57
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 40.3 bits (90), Expect = 0.018
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKL-K 157
IV+D + +LGRLA++ A +++ G VV++ +++ ++G + +KL K
Sbjct: 127 IVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKLYK 186
Query: 158 FMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
R + A R P +I+ ++GM+P KT G+ ++L Y G P
Sbjct: 187 RHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLP-KTRLGREQFKQLHIYAGDENP 243
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 39.9 bits (89), Expect = 0.024
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 41 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHF- 217
L+G+ + + + N V+++ Q+ I+GN +N K + +H
Sbjct: 37 LMGKNRSTYSYNSMSANFVIIINSRQVAITGN--KNTQKVYKRYSAKPGATKTESFYHLK 94
Query: 218 -RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
R P++IL + V+GM+P K+ GK L+ Y G P
Sbjct: 95 KRIPNRILEQAVKGMLP-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 39.5 bits (88), Expect = 0.031
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 190
++I+ + +LGRLA+ + K LL + + +V+ QI ++GN ++NK S+ R
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK----SYRRHSGRP 56
Query: 191 NPARGPFHFRAPSK-ILWKTVRGMIPHKTERGKNALRRLR 307
+ + ++ K L ++GM+P K +G+ R++R
Sbjct: 57 GGMKIRYFYQIGGKRALEHAIKGMLP-KGVKGRQLWRKIR 95
>UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13;
n=4; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L13 - Guillardia theta (Cryptomonas phi)
Length = 143
Score = 38.7 bits (86), Expect = 0.055
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Frame = +2
Query: 8 GKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNK 151
GK +ID LGRLA+ AK L+ N +V++ ++I ++GN +K
Sbjct: 14 GKWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDK 73
Query: 152 LKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
+ + R P +IL K V+G++P K G+ L+ Y G P
Sbjct: 74 FYYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHP 132
Query: 332 FD 337
+
Sbjct: 133 HE 134
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 38.3 bits (85), Expect = 0.072
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKL 154
K V+D G LGRLA+ +A++L G+ VVV+ E+I I+G NK
Sbjct: 13 KWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKADNK- 71
Query: 155 KFMSFLRKRCNVNPARGPFHF-RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
K+ + + R P IL ++GM+P K++ GK +L+ Y G P
Sbjct: 72 KYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLP-KSKLGKAMGGKLKVYRGADHP 130
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 37.9 bits (84), Expect = 0.096
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 86 GNKVVVVRCEQINISGNFFRNKLKFMSFLRK-RCNVNPARGPFHFRAPSKILWKTVRGMI 262
G+ VVV C++I ++G F K + R + + + +IL K V GM+
Sbjct: 54 GDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGML 113
Query: 263 PHKTERGKNALRRLRTYDGCPPPF 334
P K + K L RL+ +DG P+
Sbjct: 114 P-KNKLRKQRLDRLKVFDGSENPY 136
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 37.9 bits (84), Expect = 0.096
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Frame = +2
Query: 5 RGKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRN 148
R + V+D +LGRLAA IA L G+ +VV+ +++ ++GN +
Sbjct: 12 RHEWFVVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINADKLRVTGNKAED 71
Query: 149 KLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 328
K + H R P++ L K V+GM+P K G +++L+ Y G
Sbjct: 72 KKYYRHSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLP-KGPLGYAMIKKLKIYAGDTH 130
Query: 329 P 331
P
Sbjct: 131 P 131
>UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein l13 - Mycoplasma
mobile
Length = 144
Score = 37.5 bits (83), Expect = 0.13
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKL 154
K V+D G +LGRLA+V+A L NK ++V+ +++ ++ +K+
Sbjct: 15 KWFVVDAEGQVLGRLASVVASYLRGKNKPTFTPNVDMGDNIIVINADKVVLTAKKEDDKI 74
Query: 155 KFMSF-LRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
+ S AR + P ++ K V+GMIPH T+ G+ L Y G
Sbjct: 75 YYSSSGYNGGLKAINARD-LRAKKPFALVEKAVKGMIPH-TKLGRKQFGNLYVYAG 128
>UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7;
Chlamydiaceae|Rep: 50S ribosomal protein L13 - Chlamydia
trachomatis
Length = 150
Score = 35.9 bits (79), Expect = 0.39
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Frame = +2
Query: 5 RGKA-IVIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFR 145
R KA V++ G LGRL++ +AK+L G+ V+V+ E++ ++G
Sbjct: 18 RNKAWYVVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRA 77
Query: 146 NKL--KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
K+ + F+ V P R P+ ++ V+GM+P KT+ G+ ++ LR G
Sbjct: 78 QKVYHYYTGFISGMREV-PFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134
>UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265;
Bacteria|Rep: 50S ribosomal protein L13 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 142
Score = 35.5 bits (78), Expect = 0.51
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 163
VID +G +LGR+A+ +A L G+ +V++ I ++GN ++K F
Sbjct: 17 VIDAKGKVLGRVASEVAHRLRGKHKPEFTPHVDTGDYIVIINAADIVVTGNKAQDKKYFR 76
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
R P + + K V+GM+P K G +++L+ Y G P
Sbjct: 77 HTTYPGGIRETNFEKMQQRFPGRAIQKAVKGMLP-KGPLGYAMIKKLKVYAGAEHP 131
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 34.7 bits (76), Expect = 0.89
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFRNKLKFM 163
V+D RG +LGRLA +A +L N V V+ CE + ISG+ K+ +
Sbjct: 8 VLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYYR 67
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 286
R+P+ +L V GM+P R +
Sbjct: 68 HSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDR 108
>UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast
precursor; n=47; cellular organisms|Rep: 50S ribosomal
protein L13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 241
Score = 34.7 bits (76), Expect = 0.89
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIA-----KVLLE-------GNKVVVVRCEQINISGNFFRNKLKFM 163
V+D +LGRLA+ IA K L G V+VV E++ +SG KL
Sbjct: 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRR 166
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFD 337
R R P +I+ VRGM+P K G+ L+ Y G P +
Sbjct: 167 HSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KGRLGRALFNHLKVYKGPDHPHE 223
>UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candidatus
Phytoplasma asteris|Rep: 50S ribosomal protein L13 -
Onion yellows phytoplasma
Length = 152
Score = 33.9 bits (74), Expect = 1.6
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 163
++D +G LGRLA +A +L G+ V+VV I+++G ++ K +
Sbjct: 27 LVDAKGKTLGRLATKVASILKGKHKTHYTPHVDNGDYVIVVNAAYIHLTGKKWQQKTYYK 86
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 313
+ P++++ K + GM+PH T+ G ++L Y
Sbjct: 87 HSGYPGGLTKVVASEMMRKFPTRMVEKAILGMVPH-TKLGSQIGKKLFVY 135
>UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1471
Score = 33.9 bits (74), Expect = 1.6
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 LGRLAAVIAKVLLEGNKVVVVRCE-QINISGNFFRNKLKFMSFLRKRCNVN 193
L LA +I VL+E N R E +I +S F N+ K++S RKR N N
Sbjct: 991 LDSLALIIGSVLIEAN--TCERSEFEIKVSSKAFENQFKYISEQRKRINDN 1039
>UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L13 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 146
Score = 33.9 bits (74), Expect = 1.6
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFRNKL 154
K VID +LG++A + K+L G+ V+++ ++ ++G ++ KL
Sbjct: 20 KWYVIDAADRILGKVAVDVVKILRGKHKAYYTPHQDLGDNVIIINASKVKLTGKKYQQKL 79
Query: 155 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
+ + R P L ++GM+P K G+N R L+ + G
Sbjct: 80 YYRHSRYPGGLYSDTFRTLSERKPCAPLEIAIKGMLP-KGPLGRNLFRNLKVFSG 133
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 33.5 bits (73), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 437 IRLRARDVPHDSIYGQASDRIHVVLQVLRHDACCRTV 327
I R D+P ++ +G +H+VLQ +R D CC T+
Sbjct: 3519 INARTLDIPPETFFGL---NLHIVLQQIRFDLCCTTM 3552
>UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 8
- Tribolium castaneum (Red flour beetle)
Length = 379
Score = 33.5 bits (73), Expect = 2.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 134 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 262
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>UniRef50_Q6CPB8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 398
Score = 33.5 bits (73), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 390 GFRQNTRSAAGTTTRRLLSNGGGQPSYVRSLLNAFFPRSVLCG 262
GF ++A R + NG QP+ ++ +L+ F + VLCG
Sbjct: 58 GFELGAQTAINVENDRYIVNGAHQPAKLQDVLDGFITKFVLCG 100
>UniRef50_A7I6P7 Cluster: Molybdenum ABC transporter, periplasmic
molybdate-binding protein precursor; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Molybdenum ABC
transporter, periplasmic molybdate-binding protein
precursor - Methanoregula boonei (strain 6A8)
Length = 297
Score = 33.1 bits (72), Expect = 2.7
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1
Query: 117 CSQRTTTTLFPSSRTLAITAASRPSKCPRPSITMALP 7
C+Q TTTT P++ T A TAAS P+ P ++ A P
Sbjct: 9 CTQSTTTTATPAA-TAAPTAASTPAATPVATVATAAP 44
>UniRef50_Q45461 Cluster: Choline transport system permease protein
opuBB; n=55; Bacilli|Rep: Choline transport system
permease protein opuBB - Bacillus subtilis
Length = 217
Score = 33.1 bits (72), Expect = 2.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 390 GFRQNTRSAAGTTTRRLLSNGGGQPSYVRSLLNAFFPRSVLCGIIPLTVFQRIFDGAL 217
G R +T G T GGG Y+ LN + P ++ G +P+T+ + D L
Sbjct: 141 GIRTSTIYLIGWATLASFIGGGGLGDYIFIGLNLYQPEYIIGGAVPVTILAIVIDYVL 198
>UniRef50_Q1CZA2 Cluster: Putative membrane protein; n=1; Myxococcus
xanthus DK 1622|Rep: Putative membrane protein -
Myxococcus xanthus (strain DK 1622)
Length = 480
Score = 32.7 bits (71), Expect = 3.6
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = -2
Query: 413 PHDSIYGQASDRIHVVLQVLRHDACCRTVVDNHHMYVASSMHSSH 279
PH ++ S R+ ++ V R DA + ++D+ ++++A ++H
Sbjct: 435 PHGDVWPLTSTRVRELIDVWRTDASTQVIIDDENVFMARGRFTAH 479
>UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6;
Bacteria|Rep: 50S ribosomal protein L13 - Deinococcus
radiodurans
Length = 174
Score = 32.7 bits (71), Expect = 3.6
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAK------------VLLEGNKVVVVRCEQINISGNFFRNKL-- 154
+V+D G LGRLA +IA +++G+ VVV+ Q+ ++G +K+
Sbjct: 42 VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYT 101
Query: 155 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
++ + + AR + P +++ V GM+P K +G+ RL+ Y G
Sbjct: 102 RYTGY-QGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAG 153
>UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2;
Bacteria|Rep: 50S ribosomal protein L13 - Bdellovibrio
bacteriovorus
Length = 146
Score = 32.3 bits (70), Expect = 4.7
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKLKFM 163
++D G +GR+A +A +L NK VVV+ +++ +SG +++K K+
Sbjct: 17 IVDAAGQKVGRVATHVATILRGKNKAIYTPNVDTGDFVVVINTDKMELSGTKWQDK-KYY 75
Query: 164 SFLRKRCNVNPARGPFHFRAPSK-ILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 331
S R ++ S I+ + VRGM+P + ++ + +++ Y G P
Sbjct: 76 SHTRFFGSLKEMTAAQAKEKDSTFIIHEAVRGMLP-TNKLSRHVIMKMKAYTGAEHP 131
>UniRef50_Q4JTD5 Cluster: 50S ribosomal protein L13; n=1;
Corynebacterium jeikeium K411|Rep: 50S ribosomal protein
L13 - Corynebacterium jeikeium (strain K411)
Length = 190
Score = 32.3 bits (70), Expect = 4.7
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFRNKL 154
K VID +LGRLA A +L G+ V+++ +++++S N ++
Sbjct: 57 KWYVIDATDVVLGRLAVTAADLLRGKKKPYFAPNVDCGDNVIIINADKVHVSSNKREREM 116
Query: 155 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPF 334
++ + G P +++ + V+GM+PH + + ++++LR + G F
Sbjct: 117 RYRHSGYPGGLKTMSLGRSLELHPERVVEEAVKGMMPH-NKLSRASIKKLRVFAGPEHTF 175
Query: 335 D 337
+
Sbjct: 176 E 176
>UniRef50_Q8VNR5 Cluster: Ent protein; n=4; Escherichia coli|Rep:
Ent protein - Escherichia coli
Length = 549
Score = 31.9 bits (69), Expect = 6.3
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 318 PSYVRSLLNAFFPRSVLCGIIPLTVFQRIFDGALK*KGPRA---GLTLHLLRRNDINFNL 148
P+ + FF + +C II LT + + + LK G + L + + ND N N+
Sbjct: 154 PNQTATHKRVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNN-NV 212
Query: 147 FLKKLPEMLI 118
F+KKLP+ ++
Sbjct: 213 FIKKLPDNIL 222
>UniRef50_Q00XR1 Cluster: Chromosome 12 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 12 contig 1, DNA
sequence - Ostreococcus tauri
Length = 111
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 99 TTLFPSSRTLAITAASRPSKCPRPSITM 16
TT +P + LA T A RP+ CP S+TM
Sbjct: 68 TTCWPCNSCLATTEARRPNMCPLASMTM 95
>UniRef50_A7H7V3 Cluster: Putative uncharacterized protein; n=2;
Anaeromyxobacter|Rep: Putative uncharacterized protein -
Anaeromyxobacter sp. Fw109-5
Length = 244
Score = 31.5 bits (68), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 227 SKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 325
S++ W TV+ + E+G A+RRLR+ G P
Sbjct: 198 SQVPWNTVKQAAAKELEKGDEAVRRLRSIGGLP 230
>UniRef50_A3EQS3 Cluster: 50S ribosomal protein L13; n=1;
Leptospirillum sp. Group II UBA|Rep: 50S ribosomal
protein L13 - Leptospirillum sp. Group II UBA
Length = 151
Score = 31.5 bits (68), Expect = 8.3
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFRNKL 154
K +ID G +G+++ +A++L G+ V+V+ ++ ++GN +K+
Sbjct: 17 KWFLIDAAGKTVGKVSVEVARILRGKGKVCFTPHQDLGDYVIVINAGKVVLTGNKITDKM 76
Query: 155 KFM-SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDG 319
+ S A+ R P IL +V+GM+P K + K + RLR + G
Sbjct: 77 YYRHSGYPGGFKEERAKDVLE-RKPETILTHSVKGMLP-KNKLAKLYMTRLRVFPG 130
>UniRef50_A0NPD7 Cluster: Sensory box/GGDEF domain/EAL domain
protein; n=1; Stappia aggregata IAM 12614|Rep: Sensory
box/GGDEF domain/EAL domain protein - Stappia aggregata
IAM 12614
Length = 489
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 154 QFVPEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVPAPVDYYG 14
Q PE++ L + NF F+ L+N +S E PVDY G
Sbjct: 61 QLTPEQVEAERQLARSEHRNFFIFRHKLANGSIRSVEVHSTPVDYDG 107
>UniRef50_Q4XST6 Cluster: Arsenical pump-driving ATPase, putative;
n=6; Plasmodium|Rep: Arsenical pump-driving ATPase,
putative - Plasmodium chabaudi
Length = 380
Score = 31.5 bits (68), Expect = 8.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 84 KETKLWSFVVNRLTFPAISSGTN*SLCHSFVKDVMSTQPVDLFTS 218
K ++ VVN++ FP S N C +K + T D F+S
Sbjct: 265 KNISCYNIVVNQVVFPLTSQDANIESCEGLLKQIKDTNIKDSFSS 309
>UniRef50_A7EPQ6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 820
Score = 31.5 bits (68), Expect = 8.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -1
Query: 111 QRTTTTLFPSSRTLAITAASRPSKCPRPS 25
+RT+ + FPSSR+ ++ + RPS+ P P+
Sbjct: 45 RRTSLSSFPSSRSPSVMSQRRPSRSPNPT 73
>UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129;
Bacteria|Rep: 50S ribosomal protein L13 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 142
Score = 31.5 bits (68), Expect = 8.3
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 163
VID +LGR+A+ +A+ L G+ ++++ ++ ++GN +K +
Sbjct: 17 VIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIIINASKLKVTGNKTLDKKYYR 76
Query: 164 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 313
G R P + L K V+GM+P K G +++L+ Y
Sbjct: 77 HSGYPGGIYETTFGKMQERFPGRALEKAVKGMLP-KGPLGYAMIKKLKVY 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,348,867
Number of Sequences: 1657284
Number of extensions: 10349153
Number of successful extensions: 28081
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 27262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28036
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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