Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L07
         (179 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    19   4.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    19   4.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    19   4.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    19   4.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    18   8.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    18   8.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    18   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    18   8.1  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 48  NVCC*YNHAFTIKVLAVTTDNSLNKH 125
           N C  Y H    K  A+  D  + +H
Sbjct: 154 NSCMEYQHLHRYKEEALQGDGRMRQH 179


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/15 (33%), Positives = 9/15 (60%)
 Frame = -1

Query: 146 YLFWIL*MFI*RVIC 102
           Y +W   + I R++C
Sbjct: 319 YFYWSFALLITRIVC 333


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 48  NVCC*YNHAFTIKVLAVTTDNSLNKH 125
           N C  Y H    K  A+  D  + +H
Sbjct: 154 NSCMEYQHLHRYKEEALQGDGRMRQH 179


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 48  NVCC*YNHAFTIKVLAVTTDNSLNKH 125
           N C  Y H    K  A+  D  + +H
Sbjct: 154 NSCMEYQHLHRYKEEALQGDGRMRQH 179


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 66  YINSKH*NSEIY 31
           Y N  H NSE Y
Sbjct: 360 YYNKNHPNSENY 371


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
          protein protein.
          Length = 205

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 34 LFLL*CNSFL 5
          LFLL C+S+L
Sbjct: 17 LFLLICDSYL 26


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 83  NGESVIISTANIKIQKFIFALVQ 15
           + E   +S +N+K  KF+  L Q
Sbjct: 67  SSEENCVSMSNLKKLKFLLKLGQ 89


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 66  YINSKH*NSEIY 31
           Y N  H NSE Y
Sbjct: 308 YYNKNHPNSENY 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,896
Number of Sequences: 336
Number of extensions: 599
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 39
effective length of database: 109,481
effective search space used:  2189620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)