Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L06
(330 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 128 8e-31
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 128 1e-30
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 126 4e-30
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 126 4e-30
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 126 4e-30
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 126 4e-30
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 126 4e-30
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 126 4e-30
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 126 4e-30
12_02_1282 + 27528159-27529148,27529549-27529614 125 1e-29
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 1e-07
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 46 7e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 42 2e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 40 5e-04
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 35 0.018
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 34 0.024
06_03_0013 - 15393830-15394060,15394238-15394672 28 1.5
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 28 2.0
12_01_0843 + 7891622-7892524 27 2.7
02_05_0477 - 29339649-29340253,29340880-29341492 27 2.7
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 3.6
01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175 27 3.6
04_04_0692 - 27307349-27307728,27308381-27308546 27 4.7
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 26 6.2
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 26 6.2
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 26 8.3
08_02_1040 - 23873354-23874509,23875645-23875796 26 8.3
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 26 8.3
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 26 8.3
01_06_0624 - 30683249-30684631 26 8.3
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 128 bits (310), Expect = 8e-31
Identities = 59/73 (80%), Positives = 65/73 (89%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 289
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 290 SKRGILRLK*PIE 328
+KRGIL LK PIE
Sbjct: 61 AKRGILTLKYPIE 73
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 128 bits (309), Expect = 1e-30
Identities = 59/73 (80%), Positives = 65/73 (89%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 289
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 290 SKRGILRLK*PIE 328
SKRGIL LK PIE
Sbjct: 61 SKRGILTLKYPIE 73
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 126 bits (304), Expect = 4e-30
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 125 bits (301), Expect = 1e-29
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 298
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 299 GILRLK*PIE 328
GIL LK PIE
Sbjct: 65 GILTLKYPIE 74
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 214
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 307
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 308 RLK*PI 325
+ P+
Sbjct: 67 DVSYPV 72
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 280
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR----SSGETVTVVGD 66
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 226
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 34.7 bits (76), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 34.3 bits (75), Expect = 0.024
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 219 GDLVTRASWSAWVRRTPT*VMRHRAR 296
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 211
A+VVD GS + KAG A D +P V PS
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS 30
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAV 202
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 140 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 271
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175
Length = 418
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -3
Query: 328 FDGLLESEDTPLALCLITYVGVLLTHADHDALV--TRSPH 215
+DGLL+ D L CLITY +++ A ++A + RSP+
Sbjct: 14 WDGLLDPLDVDLRRCLITYGEMIM--ATYEAFIGEHRSPN 51
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 216 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 115
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFAGDDAP 193
+++VD GSG CK G++ AP
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP 161
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 69 YLFNRTI*LKTNSQCATRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWS 248
Y N + ++ N Q LP WS ++ P+C V T+ P +V R +W
Sbjct: 390 YHMNTAVKVRFNGQ--QYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVV-RFAWQ 446
Query: 249 AWVRRT 266
++ T
Sbjct: 447 SYSEDT 452
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 140 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 271
++N S K GF + V + +G P H G + G+ K S+
Sbjct: 171 IENLSSSQKKGFFKPKREKDVLSTALGTPEHGGRVQGVSSKMSW 214
>08_02_1040 - 23873354-23874509,23875645-23875796
Length = 435
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 246 TMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSSSHI 109
T W R + GN++ A++ A A P P S ++ TSS+ +
Sbjct: 320 TALRWVRSSTALRGNSSDAAAAAAAAA--APSPSSASSTPTSSTFL 363
>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 262 LLTHADHDALVTRSPHDRGKYGAGSVVSRETGFAHS 155
+L HA D V R P Y G R+ G+AHS
Sbjct: 1512 ILPHAI-DTRVPRGPRSTLYYRTGHTFQRKQGYAHS 1546
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 228 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSSSH 112
R P + + ARG S P + AL DP++ +++ H
Sbjct: 252 RRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>01_06_0624 - 30683249-30684631
Length = 460
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 180 ETTLPAPYFPRSWGDLVTRASWSAWVRRTPT*VMRHRARG 299
E+ LP + R+WG + SW+ V V+RH A G
Sbjct: 309 ESLLPEGFLDRTWGRGLVLPSWAPQVE-----VLRHPATG 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,170,839
Number of Sequences: 37544
Number of extensions: 190480
Number of successful extensions: 610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -