Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L05
         (259 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   1.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   1.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   2.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   4.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    19   6.5  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 113 PQSHLLLSDDVTQNGKHTKLDGCPTTMLWL 24
           P+  ++ S  +T++    KLD   T  LWL
Sbjct: 413 PEHVIMWSSPLTESPYFEKLDVKVTVQLWL 442


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 257 PYVSFGITRNLIIYSFHIIQNTLQPYFLWHSSTFPSVLIHITYYLVL 117
           P++ FG   NL+I   HI +       +++  + P V I+I +  VL
Sbjct: 34  PFLFFGSFYNLVIRKEHIFERIRT---IYNQFSTPYVGIYIFHQPVL 77


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 182 YFLWHSSTFPSVLIHITYYLVL*PQSH 102
           +FL+H     +++IH+   L+  P SH
Sbjct: 672 HFLFHIVIGMNLIIHVGTQLIYRPFSH 698


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 202 FKIHSSHTFFGIPLHFHPSSFI 137
           FK+H    ++  P  F P +F+
Sbjct: 93  FKVHRLEEYYPNPDKFDPDNFL 114


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 92  SDDVTQNGKHTKLDGCPTTMLWLPHD 15
           S  +T++ + T    CP  + +LP D
Sbjct: 152 SGSITRSIRLTITASCPMNLQYLPMD 177


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 111 WSKH*IVGNMNEDG 152
           WS H   GNM E+G
Sbjct: 214 WSLHPDSGNMFENG 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,145
Number of Sequences: 336
Number of extensions: 1471
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)