Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L04
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   2.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   3.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   3.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.3  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = +1

Query: 79  VKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLALDLTQFVRSS 258
           + +   ++V+ +   +  D ++ +SR++ E+   C +      PE+A    +L +F   S
Sbjct: 215 LSVFVYTLVSVILIIMGCDVVASNSRKTAEM---CYKLQ-GFYPEEAPQRKELLRFASES 270

Query: 259 RG 264
           RG
Sbjct: 271 RG 272


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 90  RCEYRCVSKAAAGSRHTQS 146
           +C+Y CV+K+   S H +S
Sbjct: 263 KCDYTCVNKSMLNS-HMKS 280


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 90  RCEYRCVSKAAAGSRHTQS 146
           +C+Y CV+K+   S H +S
Sbjct: 21  KCDYTCVNKSMLNS-HMKS 38


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 78  SEDYRCEYRCV 110
           +EDY CEY  V
Sbjct: 187 NEDYSCEYNLV 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,094
Number of Sequences: 336
Number of extensions: 977
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)