Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_L04
(329 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012044-1|AAH12044.1| 304|Homo sapiens small glutamine-rich te... 63 2e-10
AK096321-1|BAC04761.1| 304|Homo sapiens protein ( Homo sapiens ... 63 2e-10
AF368281-1|AAP29459.1| 304|Homo sapiens small glutamine rich pr... 63 2e-10
CR542282-1|CAG47077.1| 313|Homo sapiens alpha; complete cds, wi... 58 7e-09
CR533517-1|CAG38548.1| 313|Homo sapiens alpha; complete cds, in... 58 7e-09
BC008885-1|AAH08885.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
BC005165-1|AAH05165.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
BC002989-1|AAH02989.2| 313|Homo sapiens small glutamine-rich te... 58 7e-09
BC000390-1|AAH00390.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
AJ223828-1|CAA11565.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
AJ133129-1|CAB39725.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
AF408399-1|AAL01051.1| 313|Homo sapiens TPR-containing co-chape... 58 7e-09
AF368279-1|AAP29457.1| 313|Homo sapiens small glutamine rich pr... 58 7e-09
AC006538-2|AAD13117.1| 313|Homo sapiens small glutamine-rich te... 58 7e-09
>BC012044-1|AAH12044.1| 304|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, beta protein.
Length = 304
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Frame = +1
Query: 73 NEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLALD--LTQF 246
+ +K + +++ FL+ Q + DT + D +ES+EV +QC+ET F ++PED LA+ LT+
Sbjct: 2 SSIKHLVYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEM 61
Query: 247 VRSSRGIN---------PLDSGRGEALKNDGNELMK 327
SS N P D G+ + LK++GN MK
Sbjct: 62 FTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMK 97
>AK096321-1|BAC04761.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ39002 fis, clone NT2RI2024008, moderately
similar to SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE
REPEAT-CONTAINING PROTEIN. ).
Length = 304
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Frame = +1
Query: 73 NEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLALD--LTQF 246
+ +K + +++ FL+ Q + DT + D +ES+EV +QC+ET F ++PED LA+ LT+
Sbjct: 2 SSIKHLVYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEM 61
Query: 247 VRSSRGIN---------PLDSGRGEALKNDGNELMK 327
SS N P D G+ + LK++GN MK
Sbjct: 62 FTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMK 97
>AF368281-1|AAP29459.1| 304|Homo sapiens small glutamine rich
protein with tetratricopeptide repeats 2 protein.
Length = 304
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Frame = +1
Query: 73 NEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLALD--LTQF 246
+ +K + +++ FL+ Q + DT + D +ES+EV +QC+ET F ++PED LA+ LT+
Sbjct: 2 SSIKHLVYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEM 61
Query: 247 VRSSRGIN---------PLDSGRGEALKNDGNELMK 327
SS N P D G+ + LK++GN MK
Sbjct: 62 FTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMK 97
>CR542282-1|CAG47077.1| 313|Homo sapiens alpha; complete cds,
without stopcodon. protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>CR533517-1|CAG38548.1| 313|Homo sapiens alpha; complete cds, incl.
stopcodon. protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>BC008885-1|AAH08885.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>BC005165-1|AAH05165.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>BC002989-1|AAH02989.2| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>BC000390-1|AAH00390.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>AJ223828-1|CAA11565.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide (SGT) protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>AJ133129-1|CAB39725.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat containing protein protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>AF408399-1|AAL01051.1| 313|Homo sapiens TPR-containing
co-chaperone protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>AF368279-1|AAP29457.1| 313|Homo sapiens small glutamine rich
protein with tetratricopeptide repeats 1 protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
>AC006538-2|AAD13117.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide (SGT) protein.
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 MSNEVKIIAASIVAFLKRQLEADTLSLDSRESVEVGVQCIETAFDLTPEDATLAL----- 231
M N+ K +A +I+ FL QL LS D++ES+EV +QC+ETAF +T ED+ LAL
Sbjct: 1 MDNK-KRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLP 59
Query: 232 ----------DLTQFVRSSRGINPL--DSGRGEALKNDGNELMK 327
++ Q +RS P DS E LK +GNE MK
Sbjct: 60 EIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMK 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,038,200
Number of Sequences: 237096
Number of extensions: 593641
Number of successful extensions: 1430
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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