Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_L03
         (210 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1; ...    39   0.025
UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4; Arabi...    38   0.059
UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12; Endopt...    37   0.078
UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251; Eukar...    36   0.14 
UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=...    36   0.24 
UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal ...    34   0.73 
UniRef50_A7RTA1 Cluster: Predicted protein; n=1; Nematostella ve...    33   1.3  
UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2; ...    33   1.3  
UniRef50_Q4N6H2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 59

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLKPAKQL 128
           S  G+DPKF RNQ++C KG +K  K+L
Sbjct: 19  SRKGLDPKFFRNQKYCLKGMIKKQKEL 45


>UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4;
           Arabidopsis thaliana|Rep: 60S ribosomal protein L29-2 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 61

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -3

Query: 205 TLGMDPKFLRNQRFCKKGNLK 143
           T GMDPKFLRNQR+ +K N+K
Sbjct: 32  TRGMDPKFLRNQRYARKHNVK 52


>UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12;
           Endopterygota|Rep: 60S ribosomal protein L29 -
           Drosophila melanogaster (Fruit fly)
          Length = 76

 Score = 37.1 bits (82), Expect = 0.078
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNL 146
           STLGMD KFL NQR+ +KGNL
Sbjct: 31  STLGMDVKFLINQRYARKGNL 51


>UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251;
           Eukaryota|Rep: 60S ribosomal protein L29 - Homo sapiens
           (Human)
          Length = 159

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLKPAKQL 128
           S  G+DPKFLRN RF KK N K  K++
Sbjct: 31  SLKGVDPKFLRNMRFAKKHNKKGLKKM 57


>UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=2;
           Neoptera|Rep: Ribosomal protein L29e-like protein -
           Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 90

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLKPAKQL 128
           S LG+  KFL+NQRF  KGNL  A+Q+
Sbjct: 31  SKLGVCQKFLKNQRFALKGNLSTAEQV 57


>UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal
           protein L29,; n=3; Monodelphis domestica|Rep: PREDICTED:
           similar to ribosomal protein L29, - Monodelphis
           domestica
          Length = 407

 Score = 33.9 bits (74), Expect = 0.73
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLKPAKQL 128
           S  G+DPKFLRN RF KK   K  K++
Sbjct: 31  SLKGVDPKFLRNMRFAKKHKKKGLKKM 57


>UniRef50_A7RTA1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 94

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLK 143
           S  G+DPKFLRN RF KK N K
Sbjct: 66  SLKGVDPKFLRNLRFSKKHNKK 87


>UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 282

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 208 STLGMDPKFLRNQRFCKKGNLKPAK 134
           S  G+DPKF+RNQR+ K G  K  K
Sbjct: 124 SLRGVDPKFVRNQRYAKHGTEKALK 148


>UniRef50_Q4N6H2 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 307

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 51  IIYSYKLRVHFLALASRVAFLSAALN-NCLAGLRLPFLQ 164
           IIY+ + ++  LAL+ R+ FL +  N   + GL++ F+Q
Sbjct: 185 IIYTLRNKLELLALSVRIGFLESVYNLGYVKGLKMSFIQ 223


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,159,414
Number of Sequences: 1657284
Number of extensions: 1756585
Number of successful extensions: 3159
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3159
length of database: 575,637,011
effective HSP length: 48
effective length of database: 496,087,379
effective search space used: 10417834959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)