Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K23
(243 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0403 - 22622014-22622075,22622159-22622350,22624834-226249... 90 3e-19
04_04_0192 - 23471346-23471572,23473004-23473195,23474342-234744... 86 3e-18
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 32 0.056
02_01_0022 - 135655-135717,137426-137482,137559-137678,137762-13... 32 0.074
08_01_0357 + 3140610-3140612,3140742-3140900,3141027-3141068 31 0.098
03_02_0318 + 7417361-7417519,7417638-7417690,7417770-7417836,741... 31 0.098
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 28 0.91
07_01_0741 - 5651773-5651880,5651987-5652055,5652233-5652280,565... 27 1.6
08_01_0238 - 1988688-1988830,1988989-1989257,1989339-1989600,198... 27 2.8
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 27 2.8
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 27 2.8
05_06_0038 - 25100851-25101474,25101945-25102058,25102151-251024... 26 3.7
02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655... 26 3.7
12_02_0504 - 19771191-19772134,19772210-19774892 26 4.9
04_04_0963 - 29743363-29744450,29744729-29745043,29745116-297454... 26 4.9
10_01_0318 + 3493913-3496976,3497064-3497392 25 6.4
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 25 6.4
02_02_0120 + 6984482-6984643,6984748-6984797,6984936-6984996,698... 25 6.4
12_02_0785 + 23135764-23135973,23136061-23136713,23136822-231369... 25 8.5
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 25 8.5
10_08_0273 + 16395117-16395444,16397030-16397135,16397174-16397321 25 8.5
03_06_0629 + 35187318-35187320,35187424-35187534,35188089-351881... 25 8.5
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 25 8.5
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 25 8.5
01_06_0835 - 32312264-32312884,32313529-32313642,32313739-323140... 25 8.5
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 25 8.5
>02_04_0403 -
22622014-22622075,22622159-22622350,22624834-22624910,
22625026-22625039
Length = 114
Score = 89.8 bits (213), Expect = 3e-19
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3
Query: 69 MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLETL 242
MKLVRFLMKL++ETVTIELKNG+ VHGTITGVD++MNTHLK VK+TLK + + + L
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHL 58
>04_04_0192 -
23471346-23471572,23473004-23473195,23474342-23474418,
23475810-23475850,23475928-23475974,23476108-23476194,
23476807-23477011,23477747-23477866
Length = 331
Score = 86.2 bits (204), Expect = 3e-18
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 78 VRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLETL 242
+RFLMKL++ETVTIELKNG+VVHGTITGVD++MNTHLK VK+TLK + + L+ L
Sbjct: 166 LRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHL 220
>01_01_1089 -
8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 32.3 bits (70), Expect = 0.056
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 117 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREE 224
+ELKNG +G + D MN HL+ V T K+ ++
Sbjct: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDK 52
>02_01_0022 -
135655-135717,137426-137482,137559-137678,137762-137920
Length = 132
Score = 31.9 bits (69), Expect = 0.074
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 78 VRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLE 236
V+ L + + VT+ELK G V G++ + N L + T K+ + QLE
Sbjct: 9 VKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDGKVSQLE 61
>08_01_0357 + 3140610-3140612,3140742-3140900,3141027-3141068
Length = 67
Score = 31.5 bits (68), Expect = 0.098
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 69 MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKV 203
M + +L + VT+ELKN + GT+ VD +N L+ +V
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRV 45
>03_02_0318 +
7417361-7417519,7417638-7417690,7417770-7417836,
7417925-7417981,7420005-7420067
Length = 132
Score = 31.5 bits (68), Expect = 0.098
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 78 VRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLE 236
V+ L + + VT+ELK G V G + + N L + T K+ + QLE
Sbjct: 9 VKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQLE 61
>04_04_0961 +
29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 133 PFFNSIVTVSWLSFIKNLTSFILLAYRLIFI 41
P+F++I ++ WLSF N+ S + A+ L +
Sbjct: 838 PWFHNISSMEWLSFRLNMLSNFVFAFSLTLL 868
>07_01_0741 -
5651773-5651880,5651987-5652055,5652233-5652280,
5652487-5652657,5652746-5652899,5653720-5653797,
5654165-5654208,5654505-5654604,5655621-5655775
Length = 308
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 63 NKMKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMN-THLKAVKVTLKNR 218
N +K+ ++ V E+KNG+ G+ +D+ + H K K+T + R
Sbjct: 134 NDLKVAAEVVMPLINNVMAEIKNGTYPQGSFLNIDIPTDAAHHKGYKITKQGR 186
>08_01_0238 -
1988688-1988830,1988989-1989257,1989339-1989600,
1989693-1989805,1990560-1990594,1990771-1990878,
1992178-1992483
Length = 411
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 115 VTVSWLSFIKNLTSFILLAYRLIFIE 38
+T+SW+ + + + A RLIFIE
Sbjct: 227 ITISWVGVVYQMGGVVAEALRLIFIE 252
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 133 PFFNSIVTVSWLSFIKNLTSFILLAYRLIFI 41
P+F+ + V WLSF NL + + L+ +
Sbjct: 827 PWFHLMAAVEWLSFRMNLLCNFVFGFSLVLL 857
>01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = -3
Query: 178 FMATSTPVIVPWTTLPFFNSIVTVSWLSFIKNLTSFILLAYRLIFI 41
F++T++ ++ ++ F+N+ + WL F ++ S + A+ LIF+
Sbjct: 1130 FVSTNSHLMDAFSRPKFYNA-AAMEWLCFRLDMLSSLTFAFSLIFL 1174
>05_06_0038 -
25100851-25101474,25101945-25102058,25102151-25102441,
25102552-25102860,25103458-25104186
Length = 688
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 117 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLE 236
+E G + T+ +D+A+ HLK K N E Q E
Sbjct: 408 LEDSGGWMERTTVEDMDIAVRAHLKGWKFVFLNDVECQCE 447
>02_03_0406 +
18663986-18664059,18665082-18665405,18665499-18665559,
18666136-18666282,18666368-18666492,18666619-18666648,
18666689-18666893,18667532-18667741,18667886-18667888,
18670034-18670942,18671239-18672069
Length = 972
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 179 IHGDIDTSYSSVDNAAVFQLNSHRFVAELHQKSY*LHFV 63
+HG+I S S++ N V L+S+ + LHF+
Sbjct: 845 LHGEIPQSASNLKNLMVLDLSSNHLTGAIPSSLANLHFL 883
>12_02_0504 - 19771191-19772134,19772210-19774892
Length = 1208
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 148 PWTTLPFFNSIVTVSWLSFIKNLTSFILLAYRLIFIEYTG 29
P LP F + + W S +KNL S ++LI I++ G
Sbjct: 844 PENVLPPFLKTLIIRWCSSLKNLPSIPCTLHQLI-IKHVG 882
>04_04_0963 -
29743363-29744450,29744729-29745043,29745116-29745477,
29745947-29746013,29746111-29746954
Length = 891
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 205 VTFTAFRCVFMATSTPVIVPWTTLPFFNSIVTVSW 101
VT + C+ + T + +P+ FF +++T++W
Sbjct: 118 VTASPALCLVVEQPTLIFMPYADRVFFENLLTLNW 152
>10_01_0318 + 3493913-3496976,3497064-3497392
Length = 1130
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 179 IHGDIDTSYSSVDNAAVFQLNSHRFVAELH 90
+ G + + + N AV QLN++ F E+H
Sbjct: 405 LRGPVPLALWRLSNMAVLQLNNNSFSGEIH 434
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 102 G*ASSKILLASFCWLIG*FL*NTQAASVHPDP 7
G A ++L S CWL G + QAA P P
Sbjct: 154 GGAGCRVLNRSICWLGGDDVGREQAAEAEPVP 185
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 72 KLVRFLMKLSHETVTIELKNGSVVHG 149
K+ F K+ + +TIEL S++HG
Sbjct: 97 KMKSFRRKIQQKPLTIELIKSSMIHG 122
>02_02_0120 +
6984482-6984643,6984748-6984797,6984936-6984996,
6985574-6985669,6985754-6985903,6986208-6986339,
6986641-6986768,6987285-6987327,6987935-6988018,
6989049-6989090,6989264-6989334,6989621-6989674,
6989789-6989894,6990038-6990106,6990824-6990967,
6992038-6992113,6992295-6992353
Length = 508
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 93 KLSHETVTIELKNGSVVHGTIT 158
KL+ +T+ LKN ++HG +T
Sbjct: 340 KLAEQTILESLKNERILHGDVT 361
>12_02_0785 +
23135764-23135973,23136061-23136713,23136822-23136903,
23137031-23137113,23137229-23137361,23137493-23137664,
23137929-23138656
Length = 686
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 193 AFRCVFMATSTPVIVPWTTLPFFNSIVTVSWLSFIKNLTSFILLA 59
A C F + S ++ + LPF NS+ S ++I L+ F+ LA
Sbjct: 110 ARECGFTSLSVRLVKVFLLLPFRNSMQPRSCPNYIYILSCFLQLA 154
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 103 WLSFIKNLTSFILLAYRLIFIEYTGGV 23
W + K SF+L+ Y I + + GG+
Sbjct: 250 WKALRKETYSFVLIIYTFIVVWFVGGL 276
>10_08_0273 + 16395117-16395444,16397030-16397135,16397174-16397321
Length = 193
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 195 PPSDAYSWRHR 163
PP D+ SWRHR
Sbjct: 50 PPDDSSSWRHR 60
>03_06_0629 +
35187318-35187320,35187424-35187534,35188089-35188191,
35188357-35188416,35188502-35188661,35188755-35188872
Length = 184
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -3
Query: 232 NCNSSRFFKVTFTAFRCVFMATSTPVIVPWTTLPFFNSIVTVSW 101
N N +R F T + F+ +P + P T+ NS+ W
Sbjct: 104 NANLNRVFDQTACTSKYCFVLPQSPPVAPDWTIETGNSVTLNRW 147
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 89 DEAQPRNGDY*VEKRQRCPRNYNWCRCRHEYASEGGKSNFEKS 217
+E + R V + R+ NW R R ++ GK +FE S
Sbjct: 178 EEEEMRKKGQPVPMEEWTQRSRNWVRARTPKITDEGKVSFENS 220
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 72 KLVRFLMKLSHETVTIELKNGSVVHGTI--TGVDVAMNTHLKAVKV 203
+L+ L +L + V + +KNGS++ G + T D + +K +V
Sbjct: 89 RLIYVLTQLIGQHVDVHVKNGSIISGILHATNSDKDLGVIMKMAQV 134
>01_06_0835 -
32312264-32312884,32313529-32313642,32313739-32314029,
32314135-32314443,32315194-32315931
Length = 690
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 117 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLE 236
+E G + T+ +D+A+ HLK K N E Q E
Sbjct: 411 LEDSGGWMERTTVEDMDIAVRAHLKGWKFLYINDVECQCE 450
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 124 NSIVTVSWLSFIKNLTSFILLAYRLIFIEY 35
N +VTV S +KNL+ +L + + + +EY
Sbjct: 1621 NKMVTVEMESLVKNLSLELLESEKNVMLEY 1650
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,817,809
Number of Sequences: 37544
Number of extensions: 110703
Number of successful extensions: 356
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 14,793,348
effective HSP length: 59
effective length of database: 12,578,252
effective search space used: 264143292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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