Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K22
         (363 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   168   2e-42
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   168   2e-42
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   168   2e-42
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   159   1e-39
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...    98   3e-21
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    28   4.2  
BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p pro...    28   4.2  
AY051927-1|AAK93351.1|  587|Drosophila melanogaster LD41072p pro...    28   4.2  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    28   4.2  
AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA...    28   4.2  
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.         27   9.7  
BT023707-1|AAY85107.1|  510|Drosophila melanogaster IP01172p pro...    27   9.7  
BT022192-1|AAY51586.1|  510|Drosophila melanogaster IP01169p pro...    27   9.7  
AY102658-1|AAM27487.1|  608|Drosophila melanogaster GH06537p pro...    27   9.7  
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB...    27   9.7  
AE014297-4414|AAF56919.1|  510|Drosophila melanogaster CG15504-P...    27   9.7  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  168 bits (409), Expect = 2e-42
 Identities = 79/96 (82%), Positives = 85/96 (88%)
 Frame = +1

Query: 76  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 363
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R M
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 116


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  168 bits (409), Expect = 2e-42
 Identities = 79/96 (82%), Positives = 85/96 (88%)
 Frame = +1

Query: 76  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 363
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R M
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 116


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  168 bits (409), Expect = 2e-42
 Identities = 79/96 (82%), Positives = 85/96 (88%)
 Frame = +1

Query: 76  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 363
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R M
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 116


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  159 bits (385), Expect = 1e-39
 Identities = 76/97 (78%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
 Frame = +1

Query: 76  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSD 252
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 253 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 363
            E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R M
Sbjct: 81  PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 117


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score = 97.9 bits (233), Expect = 3e-21
 Identities = 47/53 (88%), Positives = 47/53 (88%)
 Frame = +1

Query: 205 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 363
           GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R M
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSM 66


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
            transmembrane protein protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 206  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 108
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


>BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p protein.
          Length = 1281

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 198  TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
            +LRC  CSL  ++KG     L +H  + ++    T   +  LL N++L    K  I T  
Sbjct: 908  SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 961

Query: 18   HDQP 7
             +QP
Sbjct: 962  REQP 965


>AY051927-1|AAK93351.1|  587|Drosophila melanogaster LD41072p
           protein.
          Length = 587

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 198 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
           +LRC  CSL  ++KG     L +H  + ++    T   +  LL N++L    K  I T  
Sbjct: 214 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 267

Query: 18  HDQP 7
            +QP
Sbjct: 268 REQP 271


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
            protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 206  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 108
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


>AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA,
            isoform A protein.
          Length = 1281

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 198  TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
            +LRC  CSL  ++KG     L +H  + ++    T   +  LL N++L    K  I T  
Sbjct: 908  SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 961

Query: 18   HDQP 7
             +QP
Sbjct: 962  REQP 965


>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 169  TQGTKIASEGLKGRVFEVSLADLQADSDAERSF 267
            T+G KI    +    FE  +ADL++DS+ +  F
Sbjct: 1513 TEGEKIVGTLIPKSCFEPLVADLRSDSEKQEEF 1545


>BT023707-1|AAY85107.1|  510|Drosophila melanogaster IP01172p
           protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 256 PHHYQPGDQQGRPQKHAPLDPQMQ 185
           PHH Q   QQ + Q H P   Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369


>BT022192-1|AAY51586.1|  510|Drosophila melanogaster IP01169p
           protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 256 PHHYQPGDQQGRPQKHAPLDPQMQ 185
           PHH Q   QQ + Q H P   Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369


>AY102658-1|AAM27487.1|  608|Drosophila melanogaster GH06537p
           protein.
          Length = 608

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 169 TQGTKIASEGLKGRVFEVSLADLQADSDAERSF 267
           T+G KI    +    FE  +ADL++DS+ +  F
Sbjct: 574 TEGEKIVGTLIPKSCFEPLVADLRSDSEKQEEF 606


>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
            isoform B protein.
          Length = 1547

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 169  TQGTKIASEGLKGRVFEVSLADLQADSDAERSF 267
            T+G KI    +    FE  +ADL++DS+ +  F
Sbjct: 1513 TEGEKIVGTLIPKSCFEPLVADLRSDSEKQEEF 1545


>AE014297-4414|AAF56919.1|  510|Drosophila melanogaster CG15504-PA
           protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 256 PHHYQPGDQQGRPQKHAPLDPQMQ 185
           PHH Q   QQ + Q H P   Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,625,059
Number of Sequences: 53049
Number of extensions: 358196
Number of successful extensions: 957
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)