Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K21
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   6.8  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    20   9.1  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    20   9.1  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    20   9.1  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    20   9.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   9.1  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 155 IDQYNEDNFKEDEAD 199
           IDQ  ED+F++   D
Sbjct: 39  IDQQKEDDFRDGNID 53


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 107 SIMAKNTSSSAFRKIDIDQYNEDNFKE 187
           S ++ N   S +   + + YN +N+K+
Sbjct: 83  SSLSNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 107 SIMAKNTSSSAFRKIDIDQYNEDNFKE 187
           S ++ N   S +   + + YN +N+K+
Sbjct: 83  SSLSNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 107 SIMAKNTSSSAFRKIDIDQYNEDNFKE 187
           S ++ N   S +   + + YN +N+K+
Sbjct: 83  SSLSNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 107 SIMAKNTSSSAFRKIDIDQYNEDNFKE 187
           S ++ N   S +   + + YN +N+K+
Sbjct: 83  SSLSNNYKYSNYNNYNNNNYNNNNYKK 109


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 176 NFKEDEADQAGPTGPDEGEVCVLLNQGRYIDA 271
           ++K+D  +Q  P G  +      L   +Y DA
Sbjct: 607 DYKDDRVEQNEPIGCKDASSYCGLRDRKYPDA 638


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,828
Number of Sequences: 438
Number of extensions: 1255
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)