Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K20
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 50 7e-07
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 45 4e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 9e-05
03_01_0249 - 1935355-1935827,1936129-1936330 43 2e-04
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 42 2e-04
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 42 3e-04
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 41 5e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 40 8e-04
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 40 8e-04
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 40 0.001
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 40 0.001
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 40 0.001
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 40 0.001
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 38 0.003
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 36 0.017
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 35 0.030
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 35 0.040
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 33 0.12
05_04_0304 - 20048518-20049003,20049074-20049412 32 0.21
04_04_0768 - 27954149-27954911,27954955-27955328 31 0.65
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 30 0.86
11_06_0404 - 23153454-23154305,23154335-23155627 29 1.5
11_01_0443 - 3399226-3399242,3399551-3399731,3399847-3399936,340... 29 1.5
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 29 1.5
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 29 2.6
10_02_0061 - 4812903-4812940,4813140-4813536 28 3.5
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 28 4.6
07_03_0849 + 21997758-21998423 28 4.6
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 4.6
01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093 28 4.6
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094... 27 6.0
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 27 6.0
04_04_0949 - 29597934-29598362 27 8.0
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 27 8.0
01_01_0370 + 2895685-2895717,2895892-2896944 27 8.0
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
GEH PEF+K++P VP LVD I +S AI YL +KY + L P+D + +AL
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMKAL 104
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 337
GEH P+ L +P VP L D L +WESRAI Y+ K K L D + A+VD
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKESAMVD 96
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALV 334
GE PE ++ +P +P L D L ++ESRAI Y++ KY K L D R ALV
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALV 98
Query: 335 D 337
D
Sbjct: 99 D 99
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY 283
GEH P FLKL P VP D +++ESRAI Y+ ++Y
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQY 80
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 167 HLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY-GKGSSLYPEDA 316
H +P FL L+P +P L D ++ESRAI Y+ KY +G+ L P +A
Sbjct: 45 HKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAEA 95
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 176 PEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRL 346
P++ K++P VP LVD +I +S AII YL +KY + L P+D + +AL Q L
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQGL 99
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY 283
G+H +PE L +P +P L D L++++SRAI Y+ KY
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 337
GEH +P + +P VP D L+++ESRAI Y++ K+G L + A+VD
Sbjct: 39 GEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG-SDLLRESNLSESAMVD 96
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PE LK +P +P D L ++ESRA+ Y++ KY + + L + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTEAAMVD 99
Query: 338 QRLYFDIGTLYQRFGDYFYPQVF 406
+ +I Y Y +F
Sbjct: 100 IGIEVEIHQYYPVISSIVYECLF 122
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 176 PEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
P++ K++P +P LVD L + +S AI YL +KY + +L P+D + +AL
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL 92
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVD-DGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
E PEF KL+P VP LVD D + +S AI+ YL + Y + L P+D + +AL
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKMKAL 117
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 155 HHGEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGK--GSSLYPEDARARA 328
+ G P++LKL P T DD L++ ESR I+ ++ +KY + L A RA
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYARQGNPDLIGTGALERA 98
Query: 329 LVDQRL 346
++Q L
Sbjct: 99 SIEQWL 104
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PE LK +P +P D L ++ESRAI Y++ KY + L + R A+VD
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVD 99
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 158 HGEHLKPEFLKLSPQHTVPTLVDD--GLSIWESRAIITYLVNKYGKGS 295
+G +P+ L++ + P +VD G++++ES AII YL +KYG G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY-GKGS-SLYPEDARARALV 334
G P++LKL P T D +++ ESR II ++ +KY +G+ L A R+ +
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKYKNQGNPDLIGMGALERSSI 99
Query: 335 DQRLYFDIGTLYQRFGDYFYPQVF---AGAPADKREAGQDRGR 454
+Q L + + D Y + A +K A D GR
Sbjct: 100 EQWLQTEAQSFDVPSADVVYSLAYLPAATTQPNKGAAAADGGR 142
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 161 GEHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 337
GE+ L SP +P D ++++ESRAI Y++ Y K L + A+VD
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVD 96
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 34.7 bits (76), Expect = 0.040
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNK 280
EH PE +P VP L D L ++ESRAI Y++ K
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVDDGLSIWE 247
EHL PEF K++P VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 32.3 bits (70), Expect = 0.21
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 185 LKLSPQHT-VPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
L+L+P H VP LV G + ES I+ YL + + + L P D RAL
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>04_04_0768 - 27954149-27954911,27954955-27955328
Length = 378
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -2
Query: 484 PSRNLSKSWRASSILASFSLVGRRSGKYLRIEVISESLVEGTNVKVQALIDERPRSSVFW 305
PSR+LSK+ R + S L R G ++ + + L G + +L DER R
Sbjct: 14 PSRSLSKAVRRRADAVSAKLAARGLGAFVWQKKLERDLARGILPDIVSLRDERRRCLARR 73
Query: 304 VEAAAL 287
EAA +
Sbjct: 74 REAAGV 79
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 400 LRIEVISESLV-EGTNVKVQALIDERPRSSVFWVEAAALTVLVDQ 269
L++ ++S V EG N VQAL +ER W + AA VD+
Sbjct: 509 LQVLAAADSTVREGLNANVQALAEERAALEAEWAQLAADRARVDE 553
>11_06_0404 - 23153454-23154305,23154335-23155627
Length = 714
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 361 YPLPEIRRLLLSASICRSACRQERSWPRSRTLSSFWTNSS 480
Y L + RLLL RS CR R+ + LSSF T SS
Sbjct: 201 YLLSDWTRLLLVCEYTRSRCRWIRNATMEKLLSSFLTLSS 240
>11_01_0443 -
3399226-3399242,3399551-3399731,3399847-3399936,
3400377-3400459,3400540-3400667,3400747-3401002,
3401094-3401199,3401300-3401366,3401467-3401580,
3401811-3401889,3402189-3402359,3403135-3403267,
3403874-3404033,3404119-3404261
Length = 575
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -2
Query: 451 SSILASFSLVGRRSGKYLRIEVISESLVEGTNVKVQALIDERPRSSVFWVEAAALTVLVD 272
S LA +L GK+ + V+ V + L D R + +AL V+
Sbjct: 132 SDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSALAAAVE 191
Query: 271 QVSDD-GARLPDREAVID*RRDRVLRTQL 188
V G LPD +VI+ R+R+L+ L
Sbjct: 192 GVERQVGDNLPDHSSVIETLRERMLKPSL 220
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 185 LKLSPQHT-VPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPED 313
L +P H VP L+ +G I ESR I+ Y++++ G++L P D
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPAD 112
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 28.7 bits (61), Expect = 2.6
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = +2
Query: 164 EHLKPEFLKLSPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PEF+KL T ++ +SRAI YL ++ ++Y + RA ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSLERASIE 100
Query: 338 QRLY-----FDIGTLYQRFGDYFYPQVFAGAPADKREAGQD 445
Q L FD + F F PQ+ PAD+ ++
Sbjct: 101 QWLQAEAQSFDAPSSELVFHLAFAPQL--NIPADEARIAEN 139
>10_02_0061 - 4812903-4812940,4813140-4813536
Length = 144
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 261 SLTWSTSTVRAAASTQKTLERGRSSISACTLTLVPSTRDSEI 386
++T+ T RAA S ++ + R ++ +C TL S+RD+ +
Sbjct: 88 TVTFFEITRRAAMSGREAVVLERGTVMSCARTLASSSRDNSV 129
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 243 GSRAPSSLTWSTSTVRAAASTQKTLERGRSSISACTL 353
G R+ SSL S+S+ AAA++++ L G++S A L
Sbjct: 25 GVRSLSSLQPSSSSSAAAAASEEVLVEGKASARAAVL 61
>07_03_0849 + 21997758-21998423
Length = 221
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 270 WSTSTVRAAASTQKTLERGR-SSISACTLTLVPSTRDSEITSI 395
WS+S+V ++++ +L+ R SS S+ T T P +R ++S+
Sbjct: 73 WSSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLSSL 115
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.9 bits (59), Expect = 4.6
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 RVPVSYLKKQNNDD*FVLRSRVGALQSCSTHS*GAKPQSQ-LKVGRSPPRGAPET*ISEV 192
R+P S LKK N D + S GAL++ ST KP S ++ + PP + +V
Sbjct: 324 RLPASALKKDNAPDVAMKESSDGALETQST-----KPSSDGQQINKEPPSVVEDNKQEDV 378
Query: 193 E 195
E
Sbjct: 379 E 379
>01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093
Length = 324
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 249 RAPSSLTWSTSTVRAAASTQKTLERGRSSIS 341
R PSS W T + AA +T++ L GR SIS
Sbjct: 137 RKPSSSCWRTVVIMAATTTRRRL-AGRWSIS 166
>06_02_0068 + 11107493-11107653,11109116-11109218,11109311-11109423,
11109502-11109624,11110165-11110266,11110367-11110532,
11111215-11111331,11111438-11111478,11111735-11111836,
11111924-11112140,11112271-11112498,11112580-11112707,
11112804-11112921,11113020-11113235,11113314-11113463,
11113553-11113629,11113973-11114190,11114443-11114656,
11114744-11114823,11114898-11115015,11115092-11115262,
11116124-11116292,11116404-11116447,11116620-11116662,
11116743-11116888,11118337-11118431,11118579-11119477,
11120540-11120638,11120907-11121002,11123447-11123568,
11123675-11123767,11123922-11124114
Length = 1653
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 282 TVRAAA--STQKTLERGRSSISACTLTLVPSTRDSE 383
TVR+ + S K L+R S IS C LTL + RDS+
Sbjct: 985 TVRSYSGRSLTKLLKRWPSLISNCVLTLTDNLRDSK 1020
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Frame = +3
Query: 282 TVRAAASTQKTLER----GRSSISACTLTLVPSTRDSEITSIRKYLPERLP-------TR 428
T+ A +S + R GR ++ A + L P SEIT++ Y +RLP
Sbjct: 663 TISAHSSCNHSFSREKPSGRYAVHAEDM-LTPIESFSEITALSNYGSDRLPHFKASKMNM 721
Query: 429 EKLAKIEDALQLLDKFLD 482
E+LAKIE ++K ++
Sbjct: 722 EELAKIEQEQMFIEKEME 739
>04_04_0949 - 29597934-29598362
Length = 142
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 318 ERGRSSISACTLTLVPSTRDSEITSIRKYLP 410
E GR ++ AC L P RDS+I R P
Sbjct: 56 ETGRHALDACALCTKPLRRDSDIFMYRGDTP 86
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 249 RAPSSLTWSTSTVRAAASTQKTLERGRSSISACTLTLVPSTRDSEITSIRKYL 407
+ PSS + S+ +ST T ER +S AC L PS+ ++S + L
Sbjct: 459 KVPSSGEYVNSSQGPGSSTSSTSERIAASSVACAPGLSPSSSMGSLSSEKSSL 511
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 188 KLSPQHTVPTLVDDGLSIW 244
+L+P+H +PT +DDG + +
Sbjct: 144 RLAPEHRLPTAIDDGAAFF 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,080,059
Number of Sequences: 37544
Number of extensions: 254695
Number of successful extensions: 842
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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