Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K15
         (250 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-10|CAC51066.1|  366|Caenorhabditis elegans Hypothetical...    29   0.33 
Z68014-13|CAA92028.2|  582|Caenorhabditis elegans Hypothetical p...    27   1.3  
AY887916-1|AAX34428.1|  582|Caenorhabditis elegans anion transpo...    27   1.3  
Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical pr...    26   4.1  
AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical ...    25   5.4  
U23177-6|AAA64330.1|  318|Caenorhabditis elegans Hypothetical pr...    25   7.1  
U53155-3|AAC48267.3|  492|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical ...    25   9.4  

>AL132948-10|CAC51066.1|  366|Caenorhabditis elegans Hypothetical
           protein Y39B6A.11 protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 0.33
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 217 RTNEIMTSCTSRRVPALSLASTSGLSVYNFEQHRYVRLKI 98
           R  EI     + R+  +SL++   L    F QH+Y+RL +
Sbjct: 127 RLREISEELRAMRIDRMSLSTDQWLQEQPFRQHKYLRLNL 166


>Z68014-13|CAA92028.2|  582|Caenorhabditis elegans Hypothetical
           protein W04G3.6d protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 123 CSKLYTLSPEVLANDNAGTRLEVHDVIISFVLKLI 227
           C    T     L NDNAGT+ ++  +  + VL L+
Sbjct: 338 CWPATTALARTLINDNAGTKTQISAIFSALVLTLV 372


>AY887916-1|AAX34428.1|  582|Caenorhabditis elegans anion
           transporter SULP-7d protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 123 CSKLYTLSPEVLANDNAGTRLEVHDVIISFVLKLI 227
           C    T     L NDNAGT+ ++  +  + VL L+
Sbjct: 338 CWPATTALARTLINDNAGTKTQISAIFSALVLTLV 372


>Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical
           protein ZC506.4b protein.
          Length = 954

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 247 FLYAGSDINFRTNEIMTSCTSRRVPALSLASTSGLSVYNFEQHRYVR 107
           F   GSD   +T+ +  S +     AL+   +  L +  FE+H+ VR
Sbjct: 845 FFGTGSDFQIQTSSLCISISMSANVALACIFSPKLWIILFEKHKNVR 891


>Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical protein
            ZC506.4a protein.
          Length = 999

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 247  FLYAGSDINFRTNEIMTSCTSRRVPALSLASTSGLSVYNFEQHRYVR 107
            F   GSD   +T+ +  S +     AL+   +  L +  FE+H+ VR
Sbjct: 890  FFGTGSDFQIQTSSLCISISMSANVALACIFSPKLWIILFEKHKNVR 936


>AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical
           protein C46C11.3 protein.
          Length = 241

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 172 ALSLASTSGLSVYNFEQHRYVRLKIKVLTYL 80
           A+ L  T+ L+VY F  HRY+  +     YL
Sbjct: 124 AVILLCTNVLAVYTFYHHRYMYKRAVAALYL 154


>U23177-6|AAA64330.1|  318|Caenorhabditis elegans Hypothetical
           protein C56G2.3 protein.
          Length = 318

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 214 TNEIMTSCTS--RRVPALSLASTSGLSVYNFEQHRYVRLK 101
           T +++  C +  R+  ALS A  + +  Y    HRYV+ K
Sbjct: 205 TADVIGICVTMGRKREALSAARRANIRAYRLPIHRYVKWK 244


>U53155-3|AAC48267.3|  492|Caenorhabditis elegans Hypothetical
           protein ZC513.5 protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 184 RRVPALSLASTSGLSVYNFEQHRYVRLKIKVL 89
           RR+P + L S   + +Y+F  H+ +R  I VL
Sbjct: 282 RRLPQIVLPSVIFIFLYSFLPHKELRFIIYVL 313


>AL132902-7|CAB81993.1|  485|Caenorhabditis elegans Hypothetical
           protein Y71A12B.8 protein.
          Length = 485

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 211 NEIMTSCTSRRVPALSLASTSGLSVYNFEQHRYVR 107
           NE+  +  + R  AL   ST  LS  N E  R+VR
Sbjct: 165 NEVFRAIQTVRSIALQSYSTRILSFLNIETRRFVR 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,642,738
Number of Sequences: 27780
Number of extensions: 61465
Number of successful extensions: 102
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)