Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K14
(447 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 244 1e-64
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 244 1e-64
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 244 1e-64
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 244 1e-64
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 244 1e-64
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 244 1e-64
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 242 4e-64
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 177 1e-44
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 155 9e-38
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 244 bits (597), Expect = 1e-64
Identities = 107/146 (73%), Positives = 121/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 15 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 74
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 75 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 134
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 135 DEYNVESIDGQPGAFTCYLDAGLART 160
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 4e-64
Identities = 106/146 (72%), Positives = 120/146 (82%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 369
RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTG
Sbjct: 68 RIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTG 127
Query: 370 DEYNVEPVDNGPGAFRCYLDVGLART 447
DEYNVE +D PGAF CYLD GLART
Sbjct: 128 DEYNVESIDGQPGAFTCYLDAGLART 153
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 177 bits (432), Expect = 1e-44
Identities = 76/91 (83%), Positives = 88/91 (96%)
Frame = +1
Query: 10 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 189
KNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+
Sbjct: 8 KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYA 67
Query: 190 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 282
RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 68 RIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 155 bits (375), Expect = 9e-38
Identities = 67/103 (65%), Positives = 79/103 (76%)
Frame = +1
Query: 139 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 318
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 319 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLART 447
D +Y G EVTGDEYNVE +D PGAF CYLD GLART
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,106,454
Number of Sequences: 237096
Number of extensions: 1468864
Number of successful extensions: 11653
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11653
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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