Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K10
         (290 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical pr...    30   0.24 
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    26   3.9  
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p...    26   3.9  
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p...    26   3.9  
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    26   3.9  
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr...    26   3.9  
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr...    26   3.9  
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase...    26   3.9  
U97012-5|AAK39149.1|  515|Caenorhabditis elegans Hypothetical pr...    25   6.8  

>Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical
           protein F36A2.6 protein.
          Length = 151

 Score = 30.3 bits (65), Expect = 0.24
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 120 GVDLDQLLDMPNEQLMELM 176
           GVDLDQLLDM  EQ  +L+
Sbjct: 25  GVDLDQLLDMSREQFTKLL 43



 Score = 30.3 bits (65), Expect = 0.24
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 211 LKRKPMALVKKLRRAKKEAPPNEKP 285
           LKRK +AL+ K+++AKK A   EKP
Sbjct: 55  LKRKHLALIAKVQKAKKAAGVLEKP 79


>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
           PLC210 protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 193 GGSRFWLKRKPMALVKKLRRAKKEAPPNEKPE 288
           GG++  LK    A+ KKLR A +E   ++ P+
Sbjct: 586 GGAKSRLKNLKNAMQKKLRGASREGSRSQSPQ 617


>U97012-5|AAK39149.1|  515|Caenorhabditis elegans Hypothetical
           protein C04E6.5 protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 267 CLLLSTAQFLYQCHWFALEPE 205
           C L ST Q L  CH FAL  E
Sbjct: 154 CFLNSTMQALSSCHSFALRCE 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,564,978
Number of Sequences: 27780
Number of extensions: 111402
Number of successful extensions: 281
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)