Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K10
         (290 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   0.44 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   1.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   2.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   2.3  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 255 STAQFLYQCHWFALEPEART 196
           S  +  Y CHW+    EA+T
Sbjct: 186 SVMEAAYSCHWYDGSEEAKT 205


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase
          domain protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 30 FVGSVKEIRNMAE 68
          F  SVKE+RN+A+
Sbjct: 10 FANSVKELRNLAQ 22


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 166 WN*CMRALAGGSRFWLKRKPMALVK 240
           WN  M ++ G  + W  R+P  L++
Sbjct: 473 WNSWMPSIRGAIQQWTCRQPEPLIE 497


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 82  RVSSTSAMFLISLTEPTKRRKFKVPR 5
           +++   A+F+  LT  T  RK+ +P+
Sbjct: 274 KLACPPAIFIFDLTTDTLIRKYIIPK 299


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 95  TFFLKSFIDLSHVSDFFDR 39
           TF+ KS +DLS   DF  R
Sbjct: 450 TFWTKSDVDLSRGLDFTPR 468


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,664
Number of Sequences: 438
Number of extensions: 1584
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)