Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K07
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signaloso... 159 4e-40
U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical pr... 77 2e-15
AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome re... 68 1e-12
Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.15
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 31 0.26
U41263-8|AAC24430.1| 455|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 27 2.4
U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical pr... 27 2.4
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 27 2.4
AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math... 27 2.4
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical pr... 26 7.4
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z66516-2|CAA91360.1| 418|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 25 9.7
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 25 9.7
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 25 9.7
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 25 9.7
>U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signalosome
subunit protein 5 protein.
Length = 368
Score = 159 bits (386), Expect = 4e-40
Identities = 71/105 (67%), Positives = 84/105 (80%)
Frame = +1
Query: 10 DKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMI 189
+ KQQ +I AKPW+KDPH+FK IKISA+ALLKM MHA+ GG LE+MGLL G++DAN+ I
Sbjct: 33 NNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFI 92
Query: 190 VMDSFALPVEGTETRVNAQAQAYEYMTAYIEASKQVGRHENAIGW 324
++D FALPVEGTETRVNAQAQAYEYMT Y E GR E +GW
Sbjct: 93 ILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGW 137
>U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical
protein F37A4.5 protein.
Length = 319
Score = 77.4 bits (182), Expect = 2e-15
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 61 PHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRV 237
P + + IS+LALLKM+ HARSG LEVMGL+LG VD T+ V D FA+P GT V
Sbjct: 23 PDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTV 82
Query: 238 NAQAQAYEYMTAYIEASKQVGRHENAIGW 324
+ Y+ T +++ K VGR EN +GW
Sbjct: 83 ESVDPVYQ--TKHMDLLKLVGRTENVVGW 109
>AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 11 protein.
Length = 312
Score = 68.1 bits (159), Expect = 1e-12
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 79 IKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQAQA 255
+ IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 256 YEYMTAYIEASKQVGRHENAIGW 324
++ ++ KQ GR E +GW
Sbjct: 93 FQ--AKMLDMLKQTGRPEMVVGW 113
>Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical
protein D2013.7 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.15
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 121 ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEASKQVG 300
A++ G + MG L+G + ++ V + FA+P + + Q + M I A K+
Sbjct: 29 AKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQM---ISALKKTS 85
Query: 301 RHENAIGW 324
+E +GW
Sbjct: 86 PNEQPVGW 93
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 79 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDAN-TMIVMDSFALPVEGTETRVNA 243
+ + L LL +V H +++ V+G+LLG + + T+ + +SFA+P + + +
Sbjct: 41 VTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKST 100
Query: 244 QAQAYEYMTAYIEASKQVGRHENAIGW 324
+Y+ + +V E +GW
Sbjct: 101 WFLDMDYLESMYGMFYKVAAKEKIVGW 127
>U41263-8|AAC24430.1| 455|Caenorhabditis elegans Hypothetical
protein T19D12.10 protein.
Length = 455
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3
Query: 324 PTNGILMTAHLF*CFNICCHIFVSLSLCIDTSFSTFYRESKRIHNNHSV 178
P +GIL + L + +++ ++ + T+F F+R+S ++H N SV
Sbjct: 173 PLSGILCESSLG--WRSIYYLYGGVAFLVTTAFFAFFRDSAQVHRNVSV 219
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 267 HIFVSLSLCIDTSFSTFYRESKRIHNNHSVC 175
H ++S SL + T F FY+E++ + +VC
Sbjct: 48 HQWLSDSLSLITHFVNFYQETRNVEQREAVC 78
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 148 MGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQA 255
+G+L V AN+ +V+DS L + TET A A
Sbjct: 151 LGILSNIVLANSQMVLDSARLSLNETETETGTSAPA 186
>U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical
protein T19D12.9 protein.
Length = 462
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 324 PTNGILMTAHLF*CFNICCHIFVSLSLCIDTSFSTFYRESKRIHNNHS 181
P +G+L + L + ++F +S+ F TF+R+S +H N S
Sbjct: 178 PVSGVLCESQLG--WRYIFYLFGGISVIAHIIFFTFFRDSATVHRNVS 223
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 148 MGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQA 255
+G+L V AN+ +V+DS L + TET A A
Sbjct: 151 LGILSNIVLANSQMVLDSARLSLNETETETGTSAPA 186
>AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math
domain containingprotein 19 protein.
Length = 418
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 201 RIHNNHSVCVNFTQEQSHNF 142
+IH H C NF E+S NF
Sbjct: 348 QIHRLHQKCANFLSEKSENF 367
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 224 VPSTGRANESITIIVFASTLPRSNPITSKVPP 129
+P+T R ++T +T P+S T+ VPP
Sbjct: 189 IPTTTRIPTTVTTTTETTTTPQSTTTTTTVPP 220
>Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical
protein T06H11.1b protein.
Length = 553
Score = 26.2 bits (55), Expect = 5.6
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 233 RVSVPSTGRANESITIIVFASTLPRS-NPITSKVPPDRACITIFKSARAEILISLKKCGS 57
R S+ STG N+++ I+ T + PI + V +CI I+ S + + I+ ++ S
Sbjct: 334 RKSLQSTGGPNDTLDILGVDGTEEKLWFPIGAYV----SCICIYCSIGSAMFITWERTWS 389
Query: 56 FSHGF 42
F H F
Sbjct: 390 FIHAF 394
>Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical
protein T06H11.1a protein.
Length = 591
Score = 26.2 bits (55), Expect = 5.6
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 233 RVSVPSTGRANESITIIVFASTLPRS-NPITSKVPPDRACITIFKSARAEILISLKKCGS 57
R S+ STG N+++ I+ T + PI + V +CI I+ S + + I+ ++ S
Sbjct: 372 RKSLQSTGGPNDTLDILGVDGTEEKLWFPIGAYV----SCICIYCSIGSAMFITWERTWS 427
Query: 56 FSHGF 42
F H F
Sbjct: 428 FIHAF 432
>Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical
protein F17A2.3 protein.
Length = 463
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 233 RVSVPSTGRANESITIIVFASTLPRSNPITSKVPPDRACITIFKSARAEILISLK 69
R++VPS G+ VF T+ NP+ +K+P A A +I S K
Sbjct: 122 RLAVPSEGKV---FIQNVFLQTMGMLNPMNTKIPEIEAFHETINVANTDIQTSTK 173
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 166 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEASKQVGRHENAIGW 324
KVDA + + S PV+ TET +++ A+ + + S Q R E I W
Sbjct: 325 KVDAVQVSTLTSALAPVKPTETVISSPPVAFNFKLPAEQTSTQPFRVE--INW 375
>Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical
protein B0391.5 protein.
Length = 378
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 282 FNICCHIFVSLSLCIDTSFSTFYRESKRIHNNHSVCV 172
F + CH VSL LC D S F + + C+
Sbjct: 109 FEVICHKEVSLRLCRDWSILNFSHHNVKYQRCDGGCM 145
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 114 YHFQKCESRDFDIFEKM-WIFLPWLRSKDILLLLLVTSC 1
+ F++ ++ FD F W+ L W+ ILL+L+ +C
Sbjct: 206 FFFRQLTAKIFDSFIIYEWLCLVWILPAIILLILVFNNC 244
>Z66516-2|CAA91360.1| 418|Caenorhabditis elegans Hypothetical
protein W03C9.2 protein.
Length = 418
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 65 CGSFSHGFAARISCCCFLSPR 3
C S H RI C C +SP+
Sbjct: 193 CVSLDHRILGRILCICLMSPQ 213
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 105 ENGNARPIWWNFRSYGIAPG*S*RKHYDCYGFVCSPC 215
E GN W + +GI G S + C + PC
Sbjct: 149 EGGNPFKAWQYIQKHGIPTGGSYESQFGCKPYSIPPC 185
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 117 HYHFQKCESRDFDIFEKMWIF 55
HYH + E RDFD E+ W F
Sbjct: 658 HYHCIQMEGRDFD--EEPWAF 676
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 117 HYHFQKCESRDFDIFEKMWIF 55
HYH + E RDFD E+ W F
Sbjct: 657 HYHCIQMEGRDFD--EEPWAF 675
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 117 HYHFQKCESRDFDIFEKMWIF 55
HYH + E RDFD E+ W F
Sbjct: 655 HYHCIQMEGRDFD--EEPWAF 673
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,865,938
Number of Sequences: 27780
Number of extensions: 154207
Number of successful extensions: 437
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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