Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K07
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.23 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.23 
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   0.94 

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.23
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 43  KPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLL 162
           KP+ KD   + ++KI +  + K++ +     T    GLLL
Sbjct: 437 KPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476



 Score = 21.0 bits (42), Expect = 3.8
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +3

Query: 33  PCCEAMGERSTFFQRYQNLGSRTFENG---NARPIWWNFRSY 149
           P  E    +  F+  Y    + T+ NG     RPIW NF  Y
Sbjct: 280 PYLEEFDWQKPFYPGYYP--TMTYSNGLPFPQRPIWSNFPIY 319


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.23
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 43  KPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLL 162
           KP+ KD   + ++KI +  + K++ +     T    GLLL
Sbjct: 437 KPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476



 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
 Frame = +3

Query: 99  TFENG---NARPIWWNFRSY 149
           T+ NG     RPIW NF  Y
Sbjct: 300 TYSNGLPFPQRPIWSNFPIY 319


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -3

Query: 267 HIFVSLSLCIDTSFSTFYRESKRIHNNHSVCVNFTQEQSH 148
           +IF  ++ C+D S  TF+ E K++ ++    +    E+ +
Sbjct: 26  NIFQDIADCVDRSNMTFH-ELKKLRDSSEARIKLINEEEN 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,994
Number of Sequences: 438
Number of extensions: 1652
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)