Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K05
(362 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 179 5e-46
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 179 5e-46
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 177 1e-45
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 172 7e-44
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 169 4e-43
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 169 4e-43
Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical pr... 29 0.75
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 29 1.00
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 4.0
AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical ... 27 4.0
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 27 5.3
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 26 7.0
Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical pr... 26 9.3
U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical pr... 26 9.3
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 179 bits (436), Expect = 5e-46
Identities = 76/118 (64%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Frame = +3
Query: 12 EVETLGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELK 188
+ L +LDP G+F+ STR+RCGRS++GYPFNPCL+EA Y EME KV + + + EL
Sbjct: 109 KTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNITDPELA 168
Query: 189 GTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWC 362
G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL+WC
Sbjct: 169 GKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWC 226
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 179 bits (436), Expect = 5e-46
Identities = 76/118 (64%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Frame = +3
Query: 12 EVETLGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELK 188
+ L +LDP G+F+ STR+RCGRS++GYPFNPCL+EA Y EME KV + + + EL
Sbjct: 146 KTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNITDPELA 205
Query: 189 GTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWC 362
G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL+WC
Sbjct: 206 GKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWC 263
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 177 bits (432), Expect = 1e-45
Identities = 76/116 (65%), Positives = 96/116 (82%), Gaps = 1/116 (0%)
Frame = +3
Query: 15 VETLGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELKG 191
V L +LDP G+F+VSTR+RCGRS++GYPFNPCL+E YK ME ++ + + + ELKG
Sbjct: 110 VGELADLDPEGKFIVSTRIRCGRSLQGYPFNPCLSETNYKMMETRMKEIFNSITDPELKG 169
Query: 192 TFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVW 359
T+YPLTGM +ET+++LI DHFLFKEGDRFL+AANA R+WP GRGI+HNE KTFLVW
Sbjct: 170 TYYPLTGMDEETKKKLIADHFLFKEGDRFLKAANANRYWPNGRGIFHNEKKTFLVW 225
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 172 bits (418), Expect = 7e-44
Identities = 75/110 (68%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 LDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELKGTFYPLT 209
LDP G+++ STR+RCGRS+ GY FNPCLTE Y EME+KV S + ELKGT+YPL
Sbjct: 128 LDPKGKYIKSTRIRCGRSLNGYQFNPCLTEDNYLEMEEKVKKAFSEFSDEELKGTYYPLD 187
Query: 210 GMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVW 359
GMSK+TQ QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN KTFL+W
Sbjct: 188 GMSKDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNKKTFLIW 237
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 169 bits (412), Expect = 4e-43
Identities = 73/110 (66%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 LDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELKGTFYPLT 209
LDP G+++ STR+RCGRS++GYPFNPCLT+ Y EME KV S + ELKG +YPL
Sbjct: 155 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLD 214
Query: 210 GMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVW 359
GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL+W
Sbjct: 215 GMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIW 264
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 169 bits (412), Expect = 4e-43
Identities = 73/110 (66%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 LDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGL-EGELKGTFYPLT 209
LDP G+++ STR+RCGRS++GYPFNPCLT+ Y EME KV S + ELKG +YPL
Sbjct: 183 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLD 242
Query: 210 GMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVW 359
GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL+W
Sbjct: 243 GMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIW 292
>Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical
protein T12A7.1 protein.
Length = 625
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +3
Query: 54 VVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGLEGELKGTFYPLTGMSKETQQ 233
++ST+ CG++M+ C ++K+ +D + + + L T G + TQ
Sbjct: 231 LISTQALCGKNMDRPIIIECYDHEKFKKQDDIIGTAQTTL-----NTLIEQAGGGESTQI 285
Query: 234 QLIDDHFLFKEGDRF 278
LI++ K+G ++
Sbjct: 286 PLINEKKKLKKGAKY 300
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 29.1 bits (62), Expect = 1.00
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 190 PLSSPSSPERVLETLSSISLYWASVRQGLKGYPSMERPQRTRVETTNSPA 41
P++ P PER +T S +G+K RP RTR+ NSP+
Sbjct: 421 PVAPPFEPERQEKTQEMRKSMSNSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 29.1 bits (62), Expect = 1.00
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 190 PLSSPSSPERVLETLSSISLYWASVRQGLKGYPSMERPQRTRVETTNSPA 41
P++ P PER +T S +G+K RP RTR+ NSP+
Sbjct: 421 PVAPPFEPERQEKTQEMRKSMSNSAEEGVK---KNRRPVRTRIRNGNSPS 467
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 42 AGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGLEGELKGTFYPLTGMSK 221
A E V R R+ G P + E K + D +SS + L+ L+G GM+K
Sbjct: 19 AREKVDEELYRLIRTTPGLPDQSWMVEDVEKTVRDFMSSRVDHLKSLLEGWEIMEKGMNK 78
Query: 222 ETQQQLIDD 248
E Q+ ++
Sbjct: 79 EIATQIFNE 87
>AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical
protein Y46H3D.7 protein.
Length = 333
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 129 YKEMEDKVSSTLSGLEGELKGTFYPLTGMSKETQQQLIDDHFL 257
++EM+D S LS + L TFY + M ++ QQ+L+ +FL
Sbjct: 122 FEEMDDVCSVDLSLVVETLVRTFYKMAPM-EDDQQRLLVKNFL 163
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 316 PVGQNRHALAAWRKRSPSLKRKWSSISC 233
P + AAW +R LK KW +C
Sbjct: 753 PCADYHYDCAAWARRGECLKNKWMPENC 780
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 118 VRQGLKGYPSMERPQRTRVETTNSPAGSRLP 26
VR+ + GY + + ++++TN+P SRLP
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLP 76
>Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical
protein F55H2.7 protein.
Length = 379
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 106 LKGYPSMERPQRTRVETTNSPAGSRLPRVST 14
++G PS R ++E T R+PRVS+
Sbjct: 141 IRGKPSFGRENSAKIERTTPRLVPRMPRVSS 171
>U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical
protein C12D12.5 protein.
Length = 241
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 187 LSSPSSPERVLETLSSISLYWASVRQGLKGY----PSMERPQRTRVETTNSPAGSRLPRV 20
LSSPSSPE E+ + IS AS + G+ S++ + ++ + P +R PR+
Sbjct: 26 LSSPSSPESPTESPNVISSVQASTIADIIGHYVNGNSIKDVVNSSQKSASQPRTAREPRI 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,226,522
Number of Sequences: 27780
Number of extensions: 118339
Number of successful extensions: 387
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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