Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K03
(102 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 0.80
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 0.80
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 2.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 19 4.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 5.6
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 19 7.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 7.5
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 19 7.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 19 7.5
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 18 9.9
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 0.80
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 64 VDILYSRQFFFYFI 23
VD+L+ R+F +Y I
Sbjct: 233 VDLLFKREFSYYLI 246
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 0.80
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 64 VDILYSRQFFFYFI 23
VD+L+ R+F +Y I
Sbjct: 233 VDLLFKREFSYYLI 246
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +1
Query: 37 KTVDCIEYQPDKNVWVQL 90
+T C+ Y P + W+ L
Sbjct: 716 ETDPCVRYYPRRKEWLYL 733
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 19.4 bits (38), Expect = 4.3
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 52 IEYQPDKNVWV 84
++++ D+NVWV
Sbjct: 489 VDHEYDQNVWV 499
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 64 VDILYSRQFFFYF 26
VD++++R FYF
Sbjct: 292 VDLIFTRDRAFYF 304
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 64 VDILYSRQFFFYF 26
VD++++R FYF
Sbjct: 261 VDLIFTRDRAFYF 273
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 64 VDILYSRQFFFYF 26
VD++++R FYF
Sbjct: 312 VDLIFTRDRAFYF 324
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 64 VDILYSRQFFFYF 26
VD++++R FYF
Sbjct: 261 VDLIFTRDRAFYF 273
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 18.6 bits (36), Expect = 7.5
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = +1
Query: 55 EYQPDKNVWVQL 90
+Y PD N W+ +
Sbjct: 300 DYYPDLNEWLYI 311
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.6 bits (36), Expect = 7.5
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2
Query: 29 LHFWYRFI 6
+H WY+FI
Sbjct: 243 VHRWYKFI 250
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.6 bits (36), Expect = 7.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 52 IEYQPDKNV 78
I +QPDKN+
Sbjct: 763 ILFQPDKNI 771
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.6 bits (36), Expect = 7.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 52 IEYQPDKNV 78
I +QPDKN+
Sbjct: 853 ILFQPDKNI 861
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 84 YPNILIWLIFY 52
Y IL W IFY
Sbjct: 77 YIVILAWAIFY 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,818
Number of Sequences: 438
Number of extensions: 305
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 14
effective length of database: 140,211
effective search space used: 2664009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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