Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_K02
         (227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   1.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   3.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   4.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   5.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   5.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 141  IIFGA*PEQRNKQMYRQENKSRV 209
            + FG    QRN  +YRQE +  V
Sbjct: 1004 LFFGC--RQRNLDLYRQEKEEMV 1024


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 142 SFSELNRNKETNKCTDKK 195
           S S  N     NKC+D+K
Sbjct: 868 SISHENNQPTMNKCSDRK 885


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 173  VSLFRLSSENDWPILMEFH**VEGFL*SNIGYFEAINYVTVR 48
            V L +L+S ++W   ++     E F  S +   EA   VTV+
Sbjct: 919  VDLTQLTSVSEWLASIKMSRYAESFERSGVTTLEAAARVTVQ 960


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 206 CMCCDNV 226
           C CCDN+
Sbjct: 13  CWCCDNL 19


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 48  SYGYVIDGFEVAYVTL*KALYLL 116
           ++ + + GFE +  T+  ALY L
Sbjct: 298 AFVFFLAGFETSSTTMSNALYEL 320


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 80  SLCYFIKSPLLTNG 121
           SL Y  K P++ NG
Sbjct: 471 SLSYLKKQPVIANG 484


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 92  FIKSPLLTNGIPLKSANHFRSLTGTK-KQTNV 184
           F  + + +NG+     N F SL   K K  NV
Sbjct: 297 FYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 92  FIKSPLLTNGIPLKSANHFRSLTGTK-KQTNV 184
           F  + + +NG+     N F SL   K K  NV
Sbjct: 297 FYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,675
Number of Sequences: 438
Number of extensions: 982
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)