Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K01
(218 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0P5L8 Cluster: 2-amino-3-ketobutyrate coenzyme A ligas... 47 7e-05
UniRef50_O75600 Cluster: 2-amino-3-ketobutyrate coenzyme A ligas... 45 4e-04
UniRef50_Q1DLC4 Cluster: Putative uncharacterized protein; n=1; ... 34 0.72
UniRef50_A6RX41 Cluster: Putative uncharacterized protein; n=2; ... 33 0.95
UniRef50_A2EAK2 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_O58591 Cluster: Putative uncharacterized protein PH0861... 33 1.7
UniRef50_Q1DQ97 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_P40209 Cluster: Protein GAT2; n=2; Saccharomyces cerevi... 32 2.9
UniRef50_UPI0000D56E87 Cluster: PREDICTED: similar to CG5020-PA,... 31 3.8
UniRef50_Q1GNT2 Cluster: RpsU-divergently transcribed; n=6; Sphi... 31 3.8
UniRef50_Q4DMY1 Cluster: Putative uncharacterized protein; n=2; ... 31 3.8
UniRef50_UPI00006A261C Cluster: UPI00006A261C related cluster; n... 31 5.1
UniRef50_UPI00006A1DF5 Cluster: kinesin family member 27; n=3; X... 31 5.1
UniRef50_Q5P3R0 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A0YPM9 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A0M4P9 Cluster: Putative uncharacterized protein; n=4; ... 31 5.1
UniRef50_Q9FZ55 Cluster: F6I1.3 protein; n=12; Magnoliophyta|Rep... 31 5.1
UniRef50_UPI00006CE93B Cluster: hypothetical protein TTHERM_0056... 31 6.7
UniRef50_A2RUZ3 Cluster: Nefm protein; n=4; Danio rerio|Rep: Nef... 31 6.7
UniRef50_A0DIE7 Cluster: Chromosome undetermined scaffold_51, wh... 31 6.7
UniRef50_A2R349 Cluster: Similarity: shows similarity to myosin ... 31 6.7
UniRef50_A1C9L7 Cluster: Viral A-type inclusion protein repeat p... 31 6.7
UniRef50_Q21952 Cluster: Kinetochore protein Nuf2 homolog; n=1; ... 31 6.7
UniRef50_Q56236 Cluster: Protein grpE; n=2; Thermus thermophilus... 31 6.7
UniRef50_UPI0000EBF141 Cluster: PREDICTED: similar to EM4b, part... 30 8.8
UniRef50_Q2AXY0 Cluster: Helix-turn-helix motif; n=1; Bacillus w... 30 8.8
UniRef50_A0YA88 Cluster: Cobt protein; n=1; marine gamma proteob... 30 8.8
UniRef50_Q26946 Cluster: P-glycoprotein; n=2; Eukaryota|Rep: P-g... 30 8.8
UniRef50_A5K7L0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_A0E1K1 Cluster: Chromosome undetermined scaffold_73, wh... 30 8.8
>UniRef50_Q0P5L8 Cluster: 2-amino-3-ketobutyrate coenzyme A ligase,
mitochondrial precursor; n=9; Euteleostomi|Rep:
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial
precursor - Bos taurus (Bovine)
Length = 419
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +1
Query: 70 KNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+++ ++ +A+LR +LE+ L+ I+ A TWK ERV+TS Q + V G+ G
Sbjct: 17 ESRAQSALAQLRGILEEELESIRGAGTWKSERVITSRQGPHIHVDGAPG 65
>UniRef50_O75600 Cluster: 2-amino-3-ketobutyrate coenzyme A ligase,
mitochondrial precursor; n=280; cellular organisms|Rep:
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial
precursor - Homo sapiens (Human)
Length = 419
Score = 44.8 bits (101), Expect = 4e-04
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 76 KERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+ ++ +A+LR +LE L+ I+ A TWK ERV+TS Q ++V G G
Sbjct: 19 RAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSG 65
>UniRef50_Q1DLC4 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1188
Score = 33.9 bits (74), Expect = 0.72
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 4 RGRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRA-KTWKHER 165
R R++ N+ + R++ ELK+K R LR ED+ +E++ A K WK R
Sbjct: 961 RDRAEDEANIIGRRRAREMEELKSKAREAERALRRAEEDK-EELEHAQKEWKRRR 1014
>UniRef50_A6RX41 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 663
Score = 33.5 bits (73), Expect = 0.95
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERV 168
+ R++ EL+ +ERA ++RE EDRL ++K ++W +R+
Sbjct: 323 EDREIAELRTEERAVENEIRET-EDRLLQMKARRSWLGDRI 362
>UniRef50_A2EAK2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 649
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 22 LRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTS 177
L+N FDN+Q+R KE + L + LED+ E+K+ K + VLTS
Sbjct: 502 LKNDFDNLQSRMNEINSKKEIPTIESLNQQLEDKNSELKKVSGDK-KPVLTS 552
>UniRef50_O58591 Cluster: Putative uncharacterized protein PH0861;
n=4; Thermococcaceae|Rep: Putative uncharacterized
protein PH0861 - Pyrococcus horikoshii
Length = 157
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 79 ERAGVAKLREVLEDRLQEIKRAKTWKHERVL 171
E G AKL E+LE+ ++EIK AKT + VL
Sbjct: 3 EMEGKAKLEELLEELMEEIKNAKTKEEVEVL 33
>UniRef50_Q1DQ97 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 610
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +1
Query: 16 QLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDT 189
QL R + + + + + E +++ E+L D+++EI + ++W + +TSP D+
Sbjct: 287 QLHRGFYPGLPPQAVRMSETGETQFFSRIAEMLGDKIEEIAKKRSWPYFPGVTSPADS 344
>UniRef50_P40209 Cluster: Protein GAT2; n=2; Saccharomyces
cerevisiae|Rep: Protein GAT2 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 560
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 40 NVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
++ T+ H L+N +L +L DR QE ++ K + E+ +SP K+K+
Sbjct: 247 SIATQNFHSLQNHITTIENRLASLLTDRQQEQQQLKQQESEKESSSPFSNKIKL 300
>UniRef50_UPI0000D56E87 Cluster: PREDICTED: similar to CG5020-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG5020-PA, isoform A - Tribolium castaneum
Length = 1018
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHE 162
QT +LH LK K + +L EVL++R++E + + ++ E
Sbjct: 903 QTSELHHLKVKLMREIQELAEVLDERVKEAEEIEKYEKE 941
>UniRef50_Q1GNT2 Cluster: RpsU-divergently transcribed; n=6;
Sphingomonadales|Rep: RpsU-divergently transcribed -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 275
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 73 NKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSP 180
N E G A R L R+ ++ R ++WKH R P
Sbjct: 223 NDESDGHADTRAFLSRRIDQVMRFESWKHRRAANKP 258
>UniRef50_Q4DMY1 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 748
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 4 RGRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQ 183
RG L V + T++L L+ ++ AK REVL+ R +E + AKT K +VL++ Q
Sbjct: 182 RGVKDLRNLVVLDEDTKELLRLR-RQLGSDAKAREVLQQRRKEAEAAKT-KQRKVLSTHQ 239
>UniRef50_UPI00006A261C Cluster: UPI00006A261C related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A261C UniRef100 entry -
Xenopus tropicalis
Length = 181
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 30 CIRQCSNTSATRVEKQGTCRSCKASGSFRRSP 125
C R + S TR G+C ASGSF RSP
Sbjct: 22 CTRSPVSGSCTRSPVSGSCTRSPASGSFTRSP 53
>UniRef50_UPI00006A1DF5 Cluster: kinesin family member 27; n=3;
Xenopus tropicalis|Rep: kinesin family member 27 -
Xenopus tropicalis
Length = 1320
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 7 GRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQD 186
G ++ ++ Q RQL EL+NKE VA ++ D ++++ AK E L + Q
Sbjct: 766 GEAEQAKSELSEAQ-RQLQELENKELRDVAHKTKLQRDFRKKMEEAKLKMQELQLKTEQQ 824
Query: 187 TKV 195
K+
Sbjct: 825 NKI 827
>UniRef50_Q5P3R0 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 728
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTS-PQDTKVK 198
R L++++ A+LRE +E+R Q R +TW ER L + P+D + +
Sbjct: 441 RDEERLRDEQARRAARLREAVEERRQ---RERTWPEERRLRAMPEDGRAR 487
>UniRef50_A0YPM9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 547
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +1
Query: 16 QLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKV 195
+LLR + N + ++ KN E +G+A+ + L++++ ++ R + + +PQD +V
Sbjct: 457 RLLRYLASNAR----NQFKNTEVSGIAERPKHLDEQIYDLLRKPIGNPDSWIKNPQDLQV 512
Query: 196 KVQG 207
+V G
Sbjct: 513 EVAG 516
>UniRef50_A0M4P9 Cluster: Putative uncharacterized protein; n=4;
Flavobacteria|Rep: Putative uncharacterized protein -
Gramella forsetii (strain KT0803)
Length = 691
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 37 DNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
+N+Q + + LKNKER + V +DRL E + ERV+T Q K KV
Sbjct: 294 ENMQRQIIVALKNKERTDAVESERVEKDRLLE-----ATERERVVTLAQIEKEKV 343
>UniRef50_Q9FZ55 Cluster: F6I1.3 protein; n=12; Magnoliophyta|Rep:
F6I1.3 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 114
Score = 31.1 bits (67), Expect = 5.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 88 GVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVK 198
G + R + E + ++I+R KTWKH + ++ + T+++
Sbjct: 2 GCSSSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMR 38
>UniRef50_UPI00006CE93B Cluster: hypothetical protein
TTHERM_00561280; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00561280 - Tetrahymena
thermophila SB210
Length = 657
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 55 QLHELKNKERAG----VAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQ 204
++ EL+NK R + K++E+ ED ++EIK+ K ++ D+K +Q
Sbjct: 347 EIKELENKRREENDYFLKKIKEIQEDHIEEIKKLKNEMQNKMDECKYDSKQSLQ 400
>UniRef50_A2RUZ3 Cluster: Nefm protein; n=4; Danio rerio|Rep: Nefm
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 707
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 16 QLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQD 186
+ LR D+++ RQLH+++++ V+ +E++ ++K K W+ R L QD
Sbjct: 306 EALRGTKDSLE-RQLHDIEDRHNTDVSSYQEMIHQLENDLKGTK-WEMARHLREYQD 360
>UniRef50_A0DIE7 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 294
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 70 KNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTK 192
KN+ER V + +++E +++I ++ KHE++L +TK
Sbjct: 37 KNREREAVKEGYQIIEQYVEQIYPQESQKHEKLLEQNTNTK 77
>UniRef50_A2R349 Cluster: Similarity: shows similarity to myosin heavy
chain of different species. precursor; n=1; Aspergillus
niger|Rep: Similarity: shows similarity to myosin heavy
chain of different species. precursor - Aspergillus niger
Length = 1129
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSD 213
+ R+L +LK K R LR V ED+ + K WK R + K + SD
Sbjct: 937 RARELEDLKGKLREAERALRTVEEDKEELEHTQKDWKRRRDQLEAESEKTTQELSD 992
>UniRef50_A1C9L7 Cluster: Viral A-type inclusion protein repeat
protein; n=5; Trichocomaceae|Rep: Viral A-type inclusion
protein repeat protein - Aspergillus clavatus
Length = 1207
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKRA-KTWKHER 165
+ R+L ELK K R LR ED+ +E++R+ K WK R
Sbjct: 1003 RARELEELKTKVREAEKALRTAEEDK-EELERSQKDWKRRR 1042
>UniRef50_Q21952 Cluster: Kinetochore protein Nuf2 homolog; n=1;
Caenorhabditis elegans|Rep: Kinetochore protein Nuf2
homolog - Caenorhabditis elegans
Length = 490
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +1
Query: 1 ARGRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSP 180
+ +++L V + +TRQ++E +K++ + LE + K+ +E VLTSP
Sbjct: 187 SNAKAELKNVVNEYTETRQINEELDKQKEEAILHIQALEKEMLTGKKTIEHLNEEVLTSP 246
Query: 181 QDTKVKVQ 204
+ K +++
Sbjct: 247 EQLKQEME 254
>UniRef50_Q56236 Cluster: Protein grpE; n=2; Thermus
thermophilus|Rep: Protein grpE - Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579)
Length = 177
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 34 FDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRA 144
FDN + R ELK +ER GV K L L ++ RA
Sbjct: 49 FDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRA 85
>UniRef50_UPI0000EBF141 Cluster: PREDICTED: similar to EM4b,
partial; n=1; Bos taurus|Rep: PREDICTED: similar to
EM4b, partial - Bos taurus
Length = 284
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 136 LSPEGDLLKLPEALQLLHVPCFSTRVAD 53
LSPEG++LK PE H C S R D
Sbjct: 124 LSPEGEMLKGPEKEASFHGACLSRRYED 151
>UniRef50_Q2AXY0 Cluster: Helix-turn-helix motif; n=1; Bacillus
weihenstephanensis KBAB4|Rep: Helix-turn-helix motif -
Bacillus weihenstephanensis KBAB4
Length = 221
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKR 141
+ R H+LKN E + L E LED+ +EIK+
Sbjct: 118 ENRLAHDLKNFESQWMMDLHEQLEDKNEEIKK 149
>UniRef50_A0YA88 Cluster: Cobt protein; n=1; marine gamma
proteobacterium HTCC2143|Rep: Cobt protein - marine
gamma proteobacterium HTCC2143
Length = 585
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +1
Query: 7 GRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQD 186
GR LR++ ++ + K++ G+ ++L++ + A W H R++ P+D
Sbjct: 441 GRLNDLRHII--YKSANMSWRKSRRNLGLMMQEDLLKENIDG--EALLWAHNRIVKRPED 496
Query: 187 TKVKVQGSDG 216
K+ + SDG
Sbjct: 497 RKILMVISDG 506
>UniRef50_Q26946 Cluster: P-glycoprotein; n=2; Eukaryota|Rep:
P-glycoprotein - Trypanosoma cruzi
Length = 1534
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 TRALTATAQCIRQCSNTS-ATRVEKQGTCRSCKASGSF 113
+RA TA AQ + + T T ++++G R+C A GSF
Sbjct: 565 SRATTAAAQTVHHPTTTGQTTSMKRRGERRTCLAEGSF 602
>UniRef50_A5K7L0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1730
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKR 141
++LHE N ++ +AKL ++LED ++IK+
Sbjct: 1659 KELHEDNNMNKSEIAKLNKLLEDANKKIKK 1688
>UniRef50_A0E1K1 Cluster: Chromosome undetermined scaffold_73, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_73,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 715
Score = 30.3 bits (65), Expect = 8.8
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 25 RNVFDNVQTRQLHELKN-KERAG--VAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTK 192
R + +++Q ++L E N +E+ G V K ++ ED E K + K ERV+TSP D K
Sbjct: 111 RGMLNSLQAQKLEEQLNIREQGGQLVIKQKQQSEDIPTETKLEE--KRERVITSPFDQK 167
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.314 0.129 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,470,380
Number of Sequences: 1657284
Number of extensions: 3208675
Number of successful extensions: 8024
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8020
length of database: 575,637,011
effective HSP length: 51
effective length of database: 491,115,527
effective search space used: 10313426067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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