Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K01
(218 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97630-2|CAB42830.1| 419|Homo sapiens glycine C-acetyltransfera... 45 5e-05
AK123190-1|BAC85552.1| 248|Homo sapiens .1.29). protein. 45 5e-05
AF077740-1|AAC27720.1| 419|Homo sapiens 2-amino-3-ketobutyrate-... 45 5e-05
BC014457-1|AAH14457.1| 419|Homo sapiens glycine C-acetyltransfe... 43 2e-04
BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein. 29 3.6
AK127045-1|BAC86801.1| 1173|Homo sapiens HO-GEF). protein. 29 3.6
AB011093-1|BAA25447.1| 1050|Homo sapiens KIAA0521 protein protein. 29 3.6
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 27 8.2
BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3 hom... 27 8.2
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 27 8.2
AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2... 27 8.2
AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2... 27 8.2
AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens ... 27 8.2
AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens ... 27 8.2
AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3 ... 27 8.2
>Z97630-2|CAB42830.1| 419|Homo sapiens glycine C-acetyltransferase
(2-amino-3-ketobutyrate coenzyme A ligase) protein.
Length = 419
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 76 KERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+ ++ +A+LR +LE L+ I+ A TWK ERV+TS Q ++V G G
Sbjct: 19 RAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSG 65
>AK123190-1|BAC85552.1| 248|Homo sapiens .1.29). protein.
Length = 248
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 76 KERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+ ++ +A+LR +LE L+ I+ A TWK ERV+TS Q ++V G G
Sbjct: 19 RAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSG 65
>AF077740-1|AAC27720.1| 419|Homo sapiens 2-amino-3-ketobutyrate-CoA
ligase protein.
Length = 419
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 76 KERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+ ++ +A+LR +LE L+ I+ A TWK ERV+TS Q ++V G G
Sbjct: 19 RAQSALAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSG 65
>BC014457-1|AAH14457.1| 419|Homo sapiens glycine
C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A
ligase) protein.
Length = 419
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 76 KERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
+ ++ +A+LR +LE L+ I A TWK ERV+TS Q ++V G G
Sbjct: 19 RAQSALAQLRGILEGELEGICGAGTWKSERVITSRQGPHIRVDGVSG 65
>BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein.
Length = 1030
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 46 QTRQLH-ELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERV 168
Q RQ + E + +ERA + KL+ L Q +R + W+H+ +
Sbjct: 694 QERQRNFEKQREERAALEKLQSQLRHEQQRWERERQWQHQEL 735
>AK127045-1|BAC86801.1| 1173|Homo sapiens HO-GEF). protein.
Length = 1173
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 46 QTRQLH-ELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERV 168
Q RQ + E + +ERA + KL+ L Q +R + W+H+ +
Sbjct: 852 QERQRNFEKQREERAALEKLQSQLRHEQQRWERERQWQHQEL 893
>AB011093-1|BAA25447.1| 1050|Homo sapiens KIAA0521 protein protein.
Length = 1050
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 46 QTRQLH-ELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERV 168
Q RQ + E + +ERA + KL+ L Q +R + W+H+ +
Sbjct: 729 QERQRNFEKQREERAALEKLQSQLRHEQQRWERERQWQHQEL 770
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 37 DNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVK 198
+ ++ R+L EL+ K R + R +DR+ + + K W+ + ++ K++
Sbjct: 208 EQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQ 261
>BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3
homolog (Chlamydomonas) protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 347 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 395
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 37 DNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVK 198
+ ++ R+L EL+ K R + R +DR+ + + K W+ + ++ K++
Sbjct: 208 EQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQ 261
>AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2
protein.
Length = 322
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 109 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 157
>AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2
protein.
Length = 418
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 205 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 253
>AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ25202 fis, clone REC05350. ).
Length = 560
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 347 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 395
>AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens
cDNA FLJ33093 fis, clone TRACH2000675, weakly similar to
RADIAL SPOKE PROTEIN 3. ).
Length = 322
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 109 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 157
>AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3
protein.
Length = 418
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 52 RQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKV 201
R+ EL+N ERA V +L E E R +E K + + ++ +T K+
Sbjct: 205 REYEELRNSERAEVQRLEE-QERRHREEKERRKKQQWEIMHKHNETSQKI 253
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.129 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,794,134
Number of Sequences: 237096
Number of extensions: 515076
Number of successful extensions: 986
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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