Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_K01
(218 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 32 0.048
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 31 0.15
Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical pr... 29 0.45
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 1.0
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 1.8
AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical ... 27 1.8
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 27 2.4
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical ... 26 4.2
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 25 5.5
U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical pr... 25 5.5
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 25 5.5
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 25 7.3
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 25 7.3
AC006629-4|AAK18927.1| 197|Caenorhabditis elegans Hypothetical ... 25 7.3
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 25 9.6
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 32.3 bits (70), Expect = 0.048
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 112 LEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSD 213
L++ L IK A T+K ERV+ Q VKV GSD
Sbjct: 33 LKNELAGIKNAGTFKTERVIQGRQGVLVKVTGSD 66
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +1
Query: 1 ARGRSQLLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSP 180
+ +++L V + +TRQ++E +K++ + LE + K+ +E VLTSP
Sbjct: 187 SNAKAELKNVVNEYTETRQINEELDKQKEEAILHIQALEKEMLTGKKTIEHLNEEVLTSP 246
Query: 181 QDTKVKVQ 204
+ K +++
Sbjct: 247 EQLKQEME 254
>Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical
protein M05D6.9 protein.
Length = 271
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 112 KLPEALQLLHVPCFSTRVADVFEHCRIHC 26
+ PE LQ H+PC++ + HCR C
Sbjct: 145 RFPEMLQ--HLPCYARAAPALIRHCRPRC 171
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 21 TAQCIRQCSNTSATRVEKQGTCRSCKASGSF 113
TAQC ++C A + K GTC+ CK + +F
Sbjct: 23 TAQC-QKCQKNEA-KYGKPGTCQYCKLNAAF 51
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 27 QCIRQCSNTSATRVEKQGTC-RSCKASGSFRRSPSGDKKS*NVET*TCVNFTSG 185
+CI+QC+N A++ +K C C + SPS S + C SG
Sbjct: 161 KCIQQCNNQCASQNQKTNQCANECNNQCANSCSPSSQTSSYSKCVSQCAEQCSG 214
>AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical
protein T05E7.1 protein.
Length = 474
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 106 EVLEDRLQEIKRAKTWKHERVLTSPQDTK 192
E + L ++KR WK E +T P TK
Sbjct: 437 EFFKKHLGDVKRIPEWKRESTVTLPVSTK 465
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 30 CIRQCSNTSATRVEKQGTCRSCKASGSFRRSPSGDKKS 143
CIR+ SN A R K+ A G SG KKS
Sbjct: 1343 CIREASNEEAQRKVKEDDDDGEDADGGLGGGDSGKKKS 1380
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 30 CIRQCSNTSATRVEKQGTCRSCKASGSFRRSPSGDKKS 143
CIR+ SN A R K+ A G SG KKS
Sbjct: 1332 CIREASNEEAQRKVKEDDDDGEDADGGLGGGDSGKKKS 1369
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 63 RVEKQGTCRSCKASGSFRRSPSGDKKS*NVET*TCVNFTSGYEGEGTRFRWR 218
+++K TC CK R P KKS + + FT+ E +G +FR R
Sbjct: 787 QMKKVATCSCCKKPIEKSREPIYKKKSQSYQR----RFTADDEDQGDKFRSR 834
>AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.3 protein.
Length = 688
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 112 LEDRLQEIKRAKTWKHERVL 171
+E+ QEI + K WKH + L
Sbjct: 173 IEEHFQEIVKMKQWKHAKYL 192
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 12 LTATAQCIRQCSNTSATRVEKQGTCRSCKASGSFRRSPS 128
L AQC +QC+N QG S +A FR + S
Sbjct: 420 LPRCAQCAQQCNNLIYRAFNSQGNQFSARAFEWFRTNNS 458
>U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical
protein R12C12.10 protein.
Length = 110
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 66 VEKQGTCRSCKASGSFRRSPSGDKKS*NVET*TCVNFTSGY 188
++ Q TC C + PSGD + T + + T GY
Sbjct: 22 LQPQPTCNGCPTCQNVNGCPSGDGAAAEATTESSASTTLGY 62
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 22 LRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKR 141
L+N + + + N++ G +L E+ E+RL I R
Sbjct: 133 LKNTIKCISLAIYYHISNRKNRGHERLMEIFEERLHPIFR 172
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 22 LRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKR 141
L+N + + + N++ G +L E+ E+RL I R
Sbjct: 135 LKNTIKCISLAIYYHISNRKNRGHERLMEIFEERLHPIFR 174
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 19 LLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRA 144
LL N+ N+Q ++ H + KE+ V K + +++ + A
Sbjct: 181 LLENILQNIQNQKEHHTQEKEKI-VIKAGSSINNQMHHLSAA 221
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 19 LLRNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRA 144
LL N+ N+Q ++ H + KE+ V K + +++ + A
Sbjct: 181 LLENILQNIQNQKEHHTQEKEKI-VIKAGSSINNQMHHLSAA 221
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +1
Query: 46 QTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGS 210
Q + HE+ +K++ A+L E + H R T P T K GS
Sbjct: 620 QHQDCHEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPTQPSTTTTKSNGS 674
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +1
Query: 25 RNVFDNVQTRQLHELKNKERAGVAKLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQ 204
R+ F+N+ +R + +ER +++ + LED ++E+ R + K E + K+K++
Sbjct: 146 RDRFENLASRV--DTLTRERDALSEHKAQLEDTIRELNRRLSAKTEDTGAEWESKKLKLR 203
>AC006629-4|AAK18927.1| 197|Caenorhabditis elegans Hypothetical
protein F12E12.3 protein.
Length = 197
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 97 KLREVLEDRLQEIKRAKTWKHERVLTSPQDTKVKVQGSDG 216
++ E +D+ QE K+WKH+ + Q T + + G
Sbjct: 55 QIYENFKDKHQEAMNYKSWKHQLDIVIAQQTLDNLLATQG 94
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 24.6 bits (51), Expect = 9.6
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 46 QTRQLHELKN--KERAGVAKLREVLEDRLQEIKRAKTW---KHERVLTSPQD 186
Q +Q + KN +ERA + RE LE Q RAK KHER+ +D
Sbjct: 327 QEKQEEKQKNEDRERATQKERREHLERHRQAEARAKALEKEKHERLQQEAKD 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.129 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,921,276
Number of Sequences: 27780
Number of extensions: 83304
Number of successful extensions: 207
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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