Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J23
(269 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 94 1e-20
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 94 1e-20
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 94 1e-20
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 94 1e-20
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 94 1e-20
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 94 1e-20
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 94 1e-20
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 52 8e-08
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 30 0.29
02_01_0043 + 300122-300907,301447-301722,302347-302481 29 0.39
01_06_1403 - 37059177-37060499,37060898-37061177,37061263-370616... 27 2.7
07_03_0855 + 22034459-22035176,22035270-22035448 26 4.7
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 26 4.7
05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171... 26 4.7
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 26 4.7
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 25 6.3
03_05_0671 + 26608953-26609671,26609775-26610495 25 6.3
02_02_0193 + 7649488-7649556,7651372-7651833,7652117-7652145,765... 25 8.3
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 64 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 123
Query: 190 DEKRKG 207
D+K KG
Sbjct: 124 DKKGKG 129
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 36 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 95
Query: 190 DEKRKG 207
D+K KG
Sbjct: 96 DKKGKG 101
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 64 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 123
Query: 190 DEKRKG 207
D+K KG
Sbjct: 124 DKKGKG 129
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 36 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 95
Query: 190 DEKRKG 207
D+K KG
Sbjct: 96 DKKGKG 101
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 63 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 122
Query: 190 DEKRKG 207
D+K KG
Sbjct: 123 DKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 64 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 123
Query: 190 DEKRKG 207
D+K KG
Sbjct: 124 DKKGKG 129
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 94.3 bits (224), Expect = 1e-20
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1
Query: 10 AAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGG 189
+AQG+RRYDRKQ GYGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GG
Sbjct: 36 SAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGG 95
Query: 190 DEKRKG 207
D+K KG
Sbjct: 96 DKKGKG 101
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 51.6 bits (118), Expect = 8e-08
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 106 IVLRLECADCKVRSQVALKRCKHFELGGDEKRKG 207
IVL+L+C CK SQ +KRCKHF++GGD+K KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 25 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 171
+ + + QG GG S +F ++LE ADC + +V RCK
Sbjct: 207 KELEGRLQGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 29.5 bits (63), Expect = 0.39
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 209 CPFLFSSPPSSKCLQRFRATCDLTLQSAH 123
CP F+SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>01_06_1403 -
37059177-37060499,37060898-37061177,37061263-37061696,
37061782-37061889
Length = 714
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 81 KEGKNYKENCTSSGMCRLQGEVAGG 155
++G+ +CT G + GEVAGG
Sbjct: 202 QKGQQDGSDCTDDGQADMDGEVAGG 226
>07_03_0855 + 22034459-22035176,22035270-22035448
Length = 298
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 154 PPATSPCSLHIPDEVQFSL*FLPSF*RW 71
P A + +L PD FS FLPS RW
Sbjct: 87 PSAAAARALADPDAADFSCSFLPSRDRW 114
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 205 PSSSRHHQAQS-AYNASGPPATSPCSLHIPDEVQF 104
P++ R + + A +S PA+ PC +P+ V+F
Sbjct: 348 PAAKRTSRTSTPATTSSSAPASGPCVRRVPEVVEF 382
>05_03_0682 -
16916437-16916686,16916761-16916822,16917082-16917147,
16917606-16917737,16917925-16918026,16918146-16918343,
16918409-16918555,16918804-16918914,16919661-16920194,
16920269-16920425,16920511-16920660,16920744-16920883,
16921668-16921784,16922759-16922932,16923020-16923187,
16923323-16923464,16923610-16923728,16924997-16925098,
16925618-16925701,16926843-16927142
Length = 1084
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 72 HLQKEGKNYKENCTSSGM 125
HL K K++KENC S G+
Sbjct: 278 HLPKIQKDHKENCCSCGL 295
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -2
Query: 199 SSRHHQAQSAY-NASGPP--ATSPCSLHIP 119
S+RHH A+ A NA+ PP A P + H P
Sbjct: 33 SARHHHAKHAKRNAAHPPSQAPGPAARHAP 62
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 115 RLECADCKVRSQVALKRCKHF-ELGGDEK 198
R+ CA C+V +K CK F +LG DEK
Sbjct: 227 RMFCARCRVPWHDGIK-CKEFRKLGDDEK 254
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 151 VALKRCKHFELGGDEKRKGQMIQ 219
+A + CKHFE E R G I+
Sbjct: 357 IAAQDCKHFEAASYEDRNGNSIR 379
>02_02_0193 +
7649488-7649556,7651372-7651833,7652117-7652145,
7653284-7653391,7653544-7653708,7653882-7653987,
7654105-7654731
Length = 521
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 211 FVPSSSRHHQAQ-SAYNASGPPATSPCSLHIPDE 113
F+P + +A S+ ++S PP+ S +H+PD+
Sbjct: 344 FIPVNRNSAEAPCSSCSSSMPPSNSGDEVHVPDQ 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,366,889
Number of Sequences: 37544
Number of extensions: 106615
Number of successful extensions: 386
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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