Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J23
         (269 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   1.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   6.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   8.2  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 153 HLRPHLAVCTFQTKYNFLCSFC 88
           H + H A    Q K +F C +C
Sbjct: 1   HQQFHCAAAEGQAKKSFSCKYC 22


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 202 SSSRHHQAQSAYNASGPPATS 140
           ++  HHQ Q A  A+   ATS
Sbjct: 96  AAHHHHQQQQAVAAAAFGATS 116


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 196 SRHHQAQSAYNASGPPA 146
           SR H  + A    GPPA
Sbjct: 33  SRRHLLELAEKIPGPPA 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,041
Number of Sequences: 438
Number of extensions: 1352
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)