Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J22
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 170 4e-43
03_01_0547 + 4093196-4093657,4094267-4095148 170 4e-43
03_01_0544 + 4082528-4082989,4083585-4084466 170 4e-43
03_01_0543 + 4076981-4077442,4078145-4079026 170 4e-43
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 97 4e-21
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 97 4e-21
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 62 2e-10
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 50 8e-07
02_04_0462 + 23131433-23132836 40 5e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 38 0.002
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.004
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 36 0.010
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 33 0.073
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 33 0.073
03_05_0511 + 25056018-25059107 32 0.17
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.22
02_04_0148 - 20198407-20201424 31 0.29
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 0.52
04_01_0103 + 1082077-1082167,1083037-1085477 29 0.90
02_04_0017 + 18937774-18937864,18938505-18940945 29 0.90
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 1.2
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.6
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 4.8
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 4.8
11_06_0412 - 23235670-23236512,23236804-23237838 27 6.3
12_02_1174 - 26696869-26698191 26 8.4
07_03_0666 + 20508976-20509154,20509230-20509292,20511732-205119... 26 8.4
01_06_0781 + 31962661-31963089,31963174-31963228,31964310-319645... 26 8.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 170 bits (413), Expect = 4e-43
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYY T+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTV 89
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 170 bits (413), Expect = 4e-43
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYY T+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTV 89
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 170 bits (413), Expect = 4e-43
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYY T+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTV 89
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 170 bits (413), Expect = 4e-43
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYY T+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTV 89
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 97.1 bits (231), Expect = 4e-21
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIALWKFETGKYYVTI 372
ERG+T+ +A+ ET KY V +
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVL 329
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 97.1 bits (231), Expect = 4e-21
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIALWKFETGKYYVTI 372
ERG+T+ +A+ ET KY V +
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVL 329
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 61.7 bits (143), Expect = 2e-10
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +1
Query: 154 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 333
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 334 LWKFETGKYYVTI 372
FET TI
Sbjct: 64 RAHFETETTRFTI 76
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 49.6 bits (113), Expect = 8e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 250 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTI 372
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V +
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVL 316
>02_04_0462 + 23131433-23132836
Length = 467
Score = 40.3 bits (90), Expect = 5e-04
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 103 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 282
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 283 LDKLKAERERGITIDIALWKFET 351
+D ER RGITI+ A ++ET
Sbjct: 108 IDAAPEERARGITINTATVEYET 130
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 38.3 bits (85), Expect = 0.002
Identities = 28/82 (34%), Positives = 37/82 (45%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEAGKAKAVAFDEIDK 107
Query: 292 LKAERERGITIDIALWKFETGK 357
E+ RGITI A ++ET K
Sbjct: 108 APEEKARGITIATAHVEYETAK 129
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 310 RGITI 324
RGIT+
Sbjct: 103 RGITV 107
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.9 bits (79), Expect = 0.010
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 310 RGITIDIALWKFETGKYYVTI 372
+GITI A Y V I
Sbjct: 120 KGITIQSAATYCTWNGYQVNI 140
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 33.1 bits (72), Expect = 0.073
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 124 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 303
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 304 RERGITI 324
+ERGITI
Sbjct: 151 QERGITI 157
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 33.1 bits (72), Expect = 0.073
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 310 RGITIDI 330
RGITI +
Sbjct: 123 RGITIKL 129
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.1 bits (67), Expect = 0.29
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 310 RGITIDIA 333
R IT+ A
Sbjct: 66 RAITMKSA 73
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 30.3 bits (65), Expect = 0.52
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 310 AHARPLVCPIPKRT*RNPYPFPGLPSR 230
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.5 bits (63), Expect = 0.90
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 201
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.5 bits (63), Expect = 0.90
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 201
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 118 KVHINIVVIGHVDSG 162
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 151 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 330
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 331 AL 336
+
Sbjct: 488 TI 489
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 205 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 327
+ K+T++ + A+EM KG + V DKL E ++ + D
Sbjct: 500 VSKKTLQDTVQCAREMLKGCNSFQSVYDKLMEEPQKALVPD 540
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 211 KRTIEKFEKEAQEMGK 258
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
>07_03_0666 +
20508976-20509154,20509230-20509292,20511732-20511987,
20512183-20512326,20512464-20512525,20512743-20512905
Length = 288
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 339 PESNIDGDTTLTLGL*FVQYPSVLEGTLTHFLGFLLE 229
PE N T LG+ + +VL G T LG L+E
Sbjct: 135 PEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIE 171
>01_06_0781 +
31962661-31963089,31963174-31963228,31964310-31964557,
31965080-31965281,31965793-31965912,31965976-31966100,
31966182-31966288,31966726-31966792
Length = 450
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 286 PIPKRT*RNPYPFPGLP 236
P +RT +PYP PGLP
Sbjct: 71 PAGRRTLASPYPSPGLP 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,851,682
Number of Sequences: 37544
Number of extensions: 190555
Number of successful extensions: 546
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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