Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J22
(374 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 190 6e-51
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 190 6e-51
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 70 8e-15
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 37 7e-05
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.39
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.51
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.8
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.8
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 4.8
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 6.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.3
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 190 bits (462), Expect = 6e-51
Identities = 87/89 (97%), Positives = 88/89 (98%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYYVTI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTI 89
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 190 bits (462), Expect = 6e-51
Identities = 87/89 (97%), Positives = 88/89 (98%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTI 372
DKLKAERERGITIDIALWKFET KYYVTI
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTI 89
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 70.1 bits (164), Expect = 8e-15
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTI 372
WVLDKLKAERERGITIDIALWKFET KYYVTI
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTI 32
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 37.1 bits (82), Expect = 7e-05
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 325 DIALWKFETGKYYVTI 372
DIALWKFET KYYVTI
Sbjct: 1 DIALWKFETSKYYVTI 16
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.39
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKST 171
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.51
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 127 INIVVIGHVDSGKST 171
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 282 YPSVLEGTLTHFLG 241
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 6.3
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 223 RWYVCRYHRIC 191
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 191 TNAVVSTNVPSKSSRRKPRKWVRVPSSTLGYWTN 292
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,341
Number of Sequences: 438
Number of extensions: 2027
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9052365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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