Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J21
(328 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 96 6e-21
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 96 6e-21
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 34 0.028
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 33 0.037
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 33 0.037
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 30 0.45
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 29 0.60
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 29 0.60
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 29 0.60
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 29 0.60
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 0.79
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 29 1.0
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 1.8
U64855-5|AAM48564.1| 79|Caenorhabditis elegans Importin beta f... 28 1.8
U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta f... 28 1.8
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 1.8
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 27 2.4
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 2.4
AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical ... 27 2.4
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 27 2.4
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 27 3.2
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 3.2
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 27 3.2
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 27 4.2
U53148-5|AAB37076.1| 130|Caenorhabditis elegans Ribosomal prote... 27 4.2
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 27 4.2
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 27 4.2
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 26 5.6
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 26 5.6
Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical p... 26 7.4
Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical pr... 26 7.4
U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical pr... 26 7.4
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 26 7.4
AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical ... 26 7.4
AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B regula... 26 7.4
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 25 9.7
U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical pr... 25 9.7
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 25 9.7
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 25 9.7
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 25 9.7
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical protein
R03E1.1 protein.
Length = 1043
Score = 95.9 bits (228), Expect = 6e-21
Identities = 41/90 (45%), Positives = 64/90 (71%)
Frame = +3
Query: 9 CKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIK 188
CK+KG N SQI+A+FS DG++I+ GSE++ +YIW+ D + SVR+DRN +WE ++
Sbjct: 884 CKFKGVQNDHSQIRAAFSPDGRHIICGSEDKFVYIWRA-SDTTVALSVRKDRNSWWERVR 942
Query: 189 AHNAVVTCAVFAPKPDHMIRMISEREEEAR 278
HNA V AVFAP+P M+++R++ ++
Sbjct: 943 THNAPVPVAVFAPRPQVFFNMLNKRDKHSK 972
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 95.9 bits (228), Expect = 6e-21
Identities = 41/90 (45%), Positives = 64/90 (71%)
Frame = +3
Query: 9 CKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIK 188
CK+KG N SQI+A+FS DG++I+ GSE++ +YIW+ D + SVR+DRN +WE ++
Sbjct: 884 CKFKGVQNDHSQIRAAFSPDGRHIICGSEDKFVYIWRA-SDTTVALSVRKDRNSWWERVR 942
Query: 189 AHNAVVTCAVFAPKPDHMIRMISEREEEAR 278
HNA V AVFAP+P M+++R++ ++
Sbjct: 943 THNAPVPVAVFAPRPQVFFNMLNKRDKHSK 972
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFS-HDGKYIVSGSENQCIYIW 116
+Y G+ N + A+FS GK+IVSGSE+ +YIW
Sbjct: 312 EYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIW 347
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIWKTYHDYSK 140
FS DG+Y+ SGS + I IW+ Y K
Sbjct: 115 FSPDGRYMGSGSADCSIKIWRMDFVYEK 142
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIW 116
F+ DG Y+ SGS + + IW
Sbjct: 240 FNRDGAYLASGSYDGIVRIW 259
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.028
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFS-HDGKYIVSGSENQCIYIW 116
+Y G+ N I A+FS GK+I+SGSE+ IYIW
Sbjct: 293 QYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 54 SFSHDGKYIVSGSENQCIYIWKT 122
SF+ DG I SGS + + IW T
Sbjct: 220 SFNRDGSLIASGSYDGLVRIWDT 242
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 9 CKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYH 128
C +G+ S K FS GKY+ + S ++ + IW H
Sbjct: 81 CTLEGHTKSISSAK--FSPCGKYLGTSSADKTVKIWNMDH 118
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 33.5 bits (73), Expect = 0.037
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 24 YVNVSSQIKASFSHDGKYIVSGSENQCIYIWKT 122
Y +A FS G+Y+++GS N ++IW T
Sbjct: 458 YKTSCDSTRAIFSSTGEYVLAGSSNSSVFIWNT 490
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 33.5 bits (73), Expect = 0.037
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 33 VSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAHNAVVTC 212
VS Q+ +FS DGK+I +G ++ + WK Y + R KAHN +T
Sbjct: 281 VSPQV-CTFSPDGKWIAAGCDDGSVQAWKYGSQYVNVNYLVR---------KAHNGSITS 330
Query: 213 AVFAPKPDHMI 245
F+P ++
Sbjct: 331 IAFSPDSKRLL 341
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 0.45
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 167 RLLGGDKGAQCGRHVRRLRAQTRSHDKDDKREGGGGSAGY 286
+++G + G G H L S D+DD R GS+GY
Sbjct: 303 QMMGHNSGFGAGNHPFYLHTSPPSVDQDDMRSLSSGSSGY 342
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKF 143
KY+ + S + F+H GK+ +S ++ + W+T + S F
Sbjct: 533 KYQLTQHESCVLSLKFAHSGKFFISTGKDNALNAWRTPYGASLF 576
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKF 143
KY+ + S + F+H GK+ +S ++ + W+T + S F
Sbjct: 533 KYQLTQHESCVLSLKFAHSGKFFISTGKDNALNAWRTPYGASLF 576
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKF 143
KY+ + S + F+H GK+ +S ++ + W+T + S F
Sbjct: 533 KYQLTQHESCVLSLKFAHSGKFFISTGKDNALNAWRTPYGASLF 576
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 12 KYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKTYHDYSKF 143
KY+ + S + F+H GK+ +S ++ + W+T + S F
Sbjct: 533 KYQLTQHESCVLSLKFAHSGKFFISTGKDNALNAWRTPYGASLF 576
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 29.1 bits (62), Expect = 0.79
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 3 TRCKYKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 116
TRC + I A FS DG+ + SGS +Q + IW
Sbjct: 95 TRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIW 132
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 28.7 bits (61), Expect = 1.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 45 IKASFSHDGKYIVSGSENQCIYIWKT 122
+ +FS D + IVSGS ++ I +W T
Sbjct: 115 LSVAFSADNRQIVSGSRDKSIKLWNT 140
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/43 (23%), Positives = 21/43 (48%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWE 179
+ FS DG ++ S +Q I++W + + F ++ + E
Sbjct: 42 SQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIME 84
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIWKT 122
+ S G+YIVSGS ++ + +W T
Sbjct: 300 SQISQCGRYIVSGSTDRTVKVWST 323
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIWKT 122
+ S G+YIVSGS ++ + +W T
Sbjct: 302 SQISQCGRYIVSGSTDRTVKVWST 325
>U64855-5|AAM48564.1| 79|Caenorhabditis elegans Importin beta
family protein 4,isoform b protein.
Length = 79
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 90 SENQCIYIWKTYHDYS-KFTSVRRDRNDFWEGIKAHNAVVTCAVFAPKPDHMIRMISERE 266
+++Q I K + ++ + +S+R DF IK HN T ++ + + I+ +R+
Sbjct: 2 NQDQIRIIIKGFFSFNTEISSMRNHLRDFLIQIKEHNGEDTSDLYLEEREAEIQQAQQRK 61
Query: 267 EEARLATNGPDDKEDE 314
+ PD+ EDE
Sbjct: 62 RDVP-GILKPDEVEDE 76
>U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta family
protein 4,isoform a protein.
Length = 1080
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 90 SENQCIYIWKTYHDYS-KFTSVRRDRNDFWEGIKAHNAVVTCAVFAPKPDHMIRMISERE 266
+++Q I K + ++ + +S+R DF IK HN T ++ + + I+ +R+
Sbjct: 1003 NQDQIRIIIKGFFSFNTEISSMRNHLRDFLIQIKEHNGEDTSDLYLEEREAEIQQAQQRK 1062
Query: 267 EEARLATNGPDDKEDE 314
+ PD+ EDE
Sbjct: 1063 RDVP-GILKPDEVEDE 1077
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIWKT 122
+ S G+YIVSGS ++ + +W T
Sbjct: 302 SQISQCGRYIVSGSTDRTVKVWST 325
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 21 GYVNVSSQIKASFSHDGKYIVSGSENQCIYIWKT 122
G+ S IK FS+ GKY+ +GS ++ I +W T
Sbjct: 211 GHTKSVSVIK--FSYCGKYLGTGSADKQIKVWNT 242
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 15 YKGYVNVSSQIKASFSHD-GKYIVSGSENQCIYIW 116
Y G+ N + A+ S GK+I+SGSE+ I +W
Sbjct: 420 YNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVW 454
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 54 SFSHDGKYIVSGSENQCIYIW 116
S++HDG + + S + CI +W
Sbjct: 346 SYNHDGNTMATSSYDGCIRVW 366
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.5 bits (58), Expect = 2.4
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 45 IKASFSHDGKYIVSGSENQCIYIWKT 122
+K S+S ++I +GS ++ +Y+W+T
Sbjct: 261 LKCSWSPCERFITAGSSDRFLYVWET 286
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 233 RSHDKDDKREGGGGSAGY 286
R + DD+R GGGG GY
Sbjct: 777 RGNSYDDRRGGGGGGGGY 794
>AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical
protein R119.7 protein.
Length = 583
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 14 IQGLRERFQSDQGLVLARREVHRQRLREPVHIHMEDLP*LLQ--VHVGEEG 160
+QGL + + QG L R++H + LRE H + E + + + H G G
Sbjct: 56 VQGLYQVLVNFQGTTLHGRQLHIRPLRESSHANSEAISTMFEKVKHQGNSG 106
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 12 KYKGYVNVSSQIKAS--FSHDGKYIVSGSENQCIYIWKTYHDYSKFTSV 152
+Y G N + IK + F +YI++GS+ +YIW D SK +
Sbjct: 429 RYGGSTNHQTDIKEANFFGSRDQYIIAGSDCGHMYIWN--RDTSKIQGI 475
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/51 (23%), Positives = 21/51 (41%)
Frame = +3
Query: 114 WKTYHDYSKFTSVRRDRNDFWEGIKAHNAVVTCAVFAPKPDHMIRMISERE 266
W+ + +V D FW ++ N V P+ +IR ++RE
Sbjct: 121 WELDGRVKRICTVEHDPTLFWAAVECDNGVQQFDTRTENPEVIIRHTADRE 171
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIW 116
A FS D Y+VSGS++ I +W
Sbjct: 220 AVFSPDANYLVSGSKDGFIEVW 241
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 21 GYVNVSSQIKASFSHDGKYIVSGSENQCIYIWK--TYHDYSKFTSVRRDRND 170
GY N+ + IK+ D + +GS++ I+IWK +D FT + D +
Sbjct: 299 GYCNIKT-IKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEE 349
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 21 GYVNVSSQIKASFSHDGKYIVSGSENQCIYIWK--TYHDYSKFTSVRRDRND 170
GY N+ + IK+ D + +GS++ I+IWK +D FT + D +
Sbjct: 298 GYCNIKT-IKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEE 348
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 33 VSSQIKASFSHDGKYIVSGSENQCIYIWK 119
++S + +S D K+++SGS I +WK
Sbjct: 322 MASVLSVLWSADSKFVLSGSNEMNIRVWK 350
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 51 ASFSHDGKYIVSGSENQCIYIW 116
A FS D Y+VSGS++ I +W
Sbjct: 220 AVFSPDANYLVSGSKDGFIEVW 241
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 149 GEEGQERLLGGDKGAQCGRHVRRLRAQTRSHDKDDKR 259
G G+ R GG K CGR R T S ++KR
Sbjct: 96 GRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKR 132
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 69 GKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAHNAVVTCAVFAP 227
GK ++S S + + +W D +++ F + I+ H V+C +AP
Sbjct: 102 GKILISASNDTTVKVWNIERD---------NKHGFIDCIRTHKDYVSCLAYAP 145
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 69 GKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAHNAVVTCAVFAP 227
GK ++S S + + +W D +++ F + I+ H V+C +AP
Sbjct: 102 GKILISASNDTTVKVWNIERD---------NKHGFIDCIRTHKDYVSCLAYAP 145
>U53148-5|AAB37076.1| 130|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 30 protein.
Length = 130
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 167 RLLGGDKGAQCGRHVRRLRAQTRSHDKDDKREGGGGSA 280
RLLGG R ++RAQT DK DK++ G A
Sbjct: 67 RLLGGKVHGSLAR-AGKVRAQTPKVDKQDKKKKKRGRA 103
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 168 DFWEGIKAHNAVVTCAVFAPKPDHMIRMISER--EEEARLATNGPDDKEDEV 317
DF+EG+K + T + A + H++ + ER +EA G +D E V
Sbjct: 84 DFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMV 135
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 168 DFWEGIKAHNAVVTCAVFAPKPDHMIRMISER--EEEARLATNGPDDKEDEV 317
DF+EG+K + T + A + H++ + ER +EA G +D E V
Sbjct: 84 DFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVEDGEGMV 135
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 27 VNVSSQIKASFSHDGK-YIVSGSENQCIYI 113
+++++ ASFSHDG+ +VS E C ++
Sbjct: 356 IHLNALTDASFSHDGRVLVVSSLEGFCSFV 385
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 27 VNVSSQIKASFSHDGK-YIVSGSENQCIYI 113
+++++ ASFSHDG+ +VS E C ++
Sbjct: 358 IHLNALTDASFSHDGRVLVVSSLEGFCSFV 387
>Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAH 194
FSHDG+Y+ +G + + I++ VR + + ++H
Sbjct: 74 FSHDGEYLATGDKGGRVVIFQRDQSGKYVKGVRSREYNVYSTFQSH 119
>Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAH 194
FSHDG+Y+ +G + + I++ VR + + ++H
Sbjct: 74 FSHDGEYLATGDKGGRVVIFQRDQSGKYVKGVRSREYNVYSTFQSH 119
>U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical
protein W06B4.3 protein.
Length = 962
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +3
Query: 87 GSENQCIYIWKTYHD---YSKFTSVRRDR 164
G+ ++ YIWKTY D Y K + R R
Sbjct: 337 GTNDEARYIWKTYLDRGEYQKALQIARTR 365
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Frame = +2
Query: 155 EGQERLLGGDKGAQCGRHVRRLRAQTRSHDKD--------DKREGGGG 274
E ER + GA GR R TR D+D D+R GGGG
Sbjct: 184 EDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGG 231
>AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical
protein Y38F1A.3 protein.
Length = 858
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 222 APKPDHMIRMISEREEEARLATNGPDDKEDE 314
AP H I ++EE + NG +D+EDE
Sbjct: 810 APLQMHEAGPIPKKEEPKVIKVNGEEDEEDE 840
>AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B
regulatory subunit PR55/B protein.
Length = 495
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIWKTYHDYSKFTSVRRDRNDFWEGIKAH 194
FSHDG+Y+ +G + + I++ VR + + ++H
Sbjct: 74 FSHDGEYLATGDKGGRVVIFQRDQSGKYVKGVRSREYNVYSTFQSH 119
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 54 SFSHDGKYIVSGSENQCIYIWKTYHD 131
++SH+G+ SG ++ + +W H+
Sbjct: 67 AWSHNGELFASGGADKLVILWNEKHE 92
>U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical
protein F33G12.2 protein.
Length = 305
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 15 YKGYVNVSSQIKASFSHDGKYIVSGSENQCIYIW 116
YKG+ N ++ +++ SGSE+ +Y++
Sbjct: 220 YKGHQNTEYKLDCRVLQSIEHVASGSEDGFVYVY 253
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 54 SFSHDGKYIVSGSENQCIYIWKTYHD 131
++SH+G+ SG ++ + +W H+
Sbjct: 67 AWSHNGELFASGGADKLVILWNEKHE 92
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 174 WEGIKAHNAVVTCAVF 221
W ++ +NAV+TC+ F
Sbjct: 681 WNNVRHYNAVITCSFF 696
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 66 DGKYIVSGSENQCIYIWK 119
DG I++G+EN I IWK
Sbjct: 38 DGATIITGAENGHIIIWK 55
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 57 FSHDGKYIVSGSENQCIYIWK 119
FS +GK + SG ++ I +WK
Sbjct: 263 FSRNGKMMASGGKSNSITLWK 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,333,653
Number of Sequences: 27780
Number of extensions: 116385
Number of successful extensions: 574
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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