Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J21
         (328 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   1.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   1.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   6.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   6.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   8.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 86  RLREPVHIHMEDLP*LLQVHVGEEGQER 169
           RL     +H+E  P LL VH+G   + R
Sbjct: 324 RLIVTAPLHVEVTPPLLSVHLGGNAEFR 351


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 86  RLREPVHIHMEDLP*LLQVHVGEEGQER 169
           RL     +H+E  P LL VH+G   + R
Sbjct: 324 RLIVTAPLHVEVTPPLLSVHLGGNAEFR 351


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 226 GAKTAHVTTALCAFIPSQKSFLSLLTD 146
           G  T  +  AL  FIP+    L+ LTD
Sbjct: 440 GIVTYFIVRALKPFIPAVTKSLASLTD 466


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 89  AADDVLPVVRERGLDLTGNVHVTLVFAPR 3
           +++ V PV     LDL   V  TL+  PR
Sbjct: 439 SSNPVSPVPSPDPLDLAIPVRETLILPPR 467


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/31 (19%), Positives = 16/31 (51%)
 Frame = -3

Query: 98  VLGAADDVLPVVRERGLDLTGNVHVTLVFAP 6
           V+    + + +  + G+D+ GN+    + +P
Sbjct: 326 VINTRGERIQLTEKNGIDVLGNIMEASILSP 356


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 226 GAKTAHVTTALCAFIPSQKSFLSLLT 149
           G+K    T A   FIP ++   S +T
Sbjct: 654 GSKIGSPTPAESTFIPEERRIYSPIT 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,831
Number of Sequences: 438
Number of extensions: 1407
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)