Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J17
(379 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 168 2e-43
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 3e-42
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 149 2e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 141 4e-35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 111 4e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 4e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 53 1e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.002
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 28 0.56
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 1.3
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 25 3.0
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 3.9
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 5.2
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 24 6.9
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 24 6.9
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 9.1
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 9.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 168 bits (409), Expect = 2e-43
Identities = 76/91 (83%), Positives = 85/91 (93%)
Frame = +1
Query: 106 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 285
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 286 TIFDAKRLIGRKFEDATVQADMKQWPFEVVS 378
TIFDAKRLIGRKF+D VQ+DMK WPF+V+S
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVIS 94
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (400), Expect = 3e-42
Identities = 74/90 (82%), Positives = 83/90 (92%)
Frame = +1
Query: 106 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 285
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 286 TIFDAKRLIGRKFEDATVQADMKQWPFEVV 375
TIFDAKRLIGR+F D VQ+DMK WPF+V+
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVI 93
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 149 bits (360), Expect = 2e-37
Identities = 65/90 (72%), Positives = 77/90 (85%)
Frame = +1
Query: 106 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 285
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 286 TIFDAKRLIGRKFEDATVQADMKQWPFEVV 375
T+FDAKRLIGR++ED Q D+K WPF+V+
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVI 97
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 141 bits (341), Expect = 4e-35
Identities = 62/90 (68%), Positives = 76/90 (84%)
Frame = +1
Query: 109 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 288
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 289 IFDAKRLIGRKFEDATVQADMKQWPFEVVS 378
IFD KRLIGRKF++ T+ D+K +PF +V+
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVN 127
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 111 bits (267), Expect = 4e-26
Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = +1
Query: 85 NKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKN 261
N+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 262 QVAMNPNNTIFDAKRLIGRKFEDATVQADMKQWPFEVV 375
Q +NP NT F KRLIGR+F++ VQ D+K+ P+++V
Sbjct: 105 QAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 68.1 bits (159), Expect = 4e-13
Identities = 29/83 (34%), Positives = 52/83 (62%)
Frame = +1
Query: 94 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 273
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 274 NPNNTIFDAKRLIGRKFEDATVQ 342
N NT+ KRL GR ++D ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIK 85
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 53.2 bits (122), Expect = 1e-08
Identities = 21/77 (27%), Positives = 45/77 (58%)
Frame = +1
Query: 109 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 288
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 289 IFDAKRLIGRKFEDATV 339
+ + + L+G+ ++ T+
Sbjct: 87 VTNFRDLLGKSHDELTL 103
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 36.3 bits (80), Expect = 0.002
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 109 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 285
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 286 TIFDAKRLIGRK-FEDATVQADMKQWP 363
+I + K L+ E VQ +P
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 27.9 bits (59), Expect = 0.56
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKQWPFEVV 375
+ F+D E GD A + P + AK L+G+ + + D + P++V+
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVL 178
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 1.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -2
Query: 273 HRNLVLGCITDKTLSVGERN 214
H++++L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 25.4 bits (53), Expect = 3.0
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 369 LERPL--FHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVLGCITDKTLSVGERNVR 208
LER L F+ GL + +DK + + +G H++ +L C ++ S+ N R
Sbjct: 51 LERRLMPFYKGLDSYSKDWPADKVVEVVEKALGPHKSALLHCAIRQSRSLSVGNTR 106
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 3.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 353 FMSACTVASSNLRPIRRLASKMVLLGFIATWFLAASPIRRSVS 225
F + C N +P S+ V GFI W +AA PI S +
Sbjct: 1543 FFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTA 1584
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 5.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 112 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 198
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 24.2 bits (50), Expect = 6.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 378 TDNLERPLFHVGLYGGIFKFASDKTFGIKDGVIGV 274
T N+ +PLF L GG+++ +T V+G+
Sbjct: 216 TRNIGKPLFSANLGGGVWRLEHMETTENYHKVLGI 250
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 24.2 bits (50), Expect = 6.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 171 LNFPMLEHTHTRVGCAQIDTN 109
L+ + EHTH R+ Q+D+N
Sbjct: 375 LDHELYEHTHKRMTQMQVDSN 395
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 9.1
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 106 AVGIDLGTTYSCVGVFQHGKVEIIAND 186
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 9.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 184 DQGNRTTPSYVAFTDTERLIGDAAKNQVA 270
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,564,162
Number of Sequences: 5004
Number of extensions: 29928
Number of successful extensions: 94
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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