Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J17
         (379 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   2.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   2.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   8.6  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    22   8.6  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 315  SDKTFGIKDGVIGVHRNLVLGCITDK 238
            +D    ++DG +G++R LV  CI  K
Sbjct: 1049 ADDLHQLEDGEVGIYRRLVGCCIGAK 1074


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  FND*LSIRYKRNKMAKAPAVGI 117
           FND L+  Y + K   AP VG+
Sbjct: 55  FNDVLNEAYAKGKAQSAPLVGL 76


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +3

Query: 93   GKSTSSWYRSGHNLLLCGCVPAWES*DHR--Q*PG 191
            GK   S+    HNLLL    P  E   H+  Q PG
Sbjct: 1803 GKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 196 RTTPSYVAFTDTERL 240
           +T PSY+AF D  R+
Sbjct: 426 KTNPSYLAFGDGPRM 440


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,366
Number of Sequences: 2352
Number of extensions: 7829
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)