Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J16
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 33 0.10
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 33 0.10
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 31 0.42
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 31 0.42
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 31 0.42
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 31 0.42
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical p... 31 0.55
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 31 0.55
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 2.2
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 2.2
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type tra... 27 5.1
AC006733-1|AAF60487.1| 610|Caenorhabditis elegans Hypothetical ... 27 5.1
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 6.8
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 57 EDKREQLKQMLTDQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAK 221
E +REQL + + D + E + VDAA A K V+V +L E E+ K
Sbjct: 130 EQRREQLTKKMEDLMDEAALEGEKGNVDAAQTAVDRADKAKVEVEELTQEAEKLK 184
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 57 EDKREQLKQMLTDQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAK 221
E +REQL + + D + E + VDAA A K V+V +L E E+ K
Sbjct: 130 EQRREQLTKKMEDLMDEAALEGEKGNVDAAQTAVDRADKAKVEVEELTQEAEKLK 184
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 48 QLPEDKREQLKQMLTDQCKKYGAE-------DKVATVDAAGRAFVECVKELVDVNQLKNE 206
QLP D++ LK+ +C+ + DKV T+ A A +K +VD + +
Sbjct: 687 QLPADQQATLKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVK 746
Query: 207 IEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVSP 317
K G EV+K+ K ++ + + ++P
Sbjct: 747 ATAEKMLGVCGEVYKESSRKRREIEAAFKDFVQWMTP 783
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c
protein.
Length = 1198
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 48 QLPEDKREQLKQMLTDQCKKYGAE-------DKVATVDAAGRAFVECVKELVDVNQLKNE 206
QLP D++ LK+ +C+ + DKV T+ A A +K +VD + +
Sbjct: 445 QLPADQQATLKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVK 504
Query: 207 IEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVSP 317
K G EV+K+ K ++ + + ++P
Sbjct: 505 ATAEKMLGVCGEVYKESSRKRREIEAAFKDFVQWMTP 541
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 48 QLPEDKREQLKQMLTDQCKKYGAE-------DKVATVDAAGRAFVECVKELVDVNQLKNE 206
QLP D++ LK+ +C+ + DKV T+ A A +K +VD + +
Sbjct: 687 QLPADQQATLKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVK 746
Query: 207 IEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVSP 317
K G EV+K+ K ++ + + ++P
Sbjct: 747 ATAEKMLGVCGEVYKESSRKRREIEAAFKDFVQWMTP 783
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 31.1 bits (67), Expect = 0.42
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 48 QLPEDKREQLKQMLTDQCKKYGAE-------DKVATVDAAGRAFVECVKELVDVNQLKNE 206
QLP D++ LK+ +C+ + DKV T+ A A +K +VD + +
Sbjct: 444 QLPADQQATLKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVK 503
Query: 207 IEEAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVSP 317
K G EV+K+ K ++ + + ++P
Sbjct: 504 ATAEKMLGVCGEVYKESSRKRREIEAAFKDFVQWMTP 540
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical
protein C29E6.2 protein.
Length = 1193
Score = 30.7 bits (66), Expect = 0.55
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 54 PEDKREQLKQMLTDQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAK 221
PE ++ L+ + CK E ++ AA + F+E +K LV+ KNE+ E K
Sbjct: 273 PETLKKILQMEKKNSCKWMDREKELIHF-AAEKGFLEVLKALVEAGGNKNELNEVK 327
>Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical
protein F54C9.8 protein.
Length = 553
Score = 30.7 bits (66), Expect = 0.55
Identities = 19/91 (20%), Positives = 40/91 (43%)
Frame = +3
Query: 9 FALLTIGVLAQDYQLPEDKREQLKQMLTDQCKKYGAEDKVATVDAAGRAFVECVKELVDV 188
FA+ GV + PED ++ +L D+ + GA AAG ++ E +
Sbjct: 156 FAMDRTGVKFLERHFPEDHDNEMHFVLFDKLTEQGAVFTSLCRSAAGNFIIQKFVEHATL 215
Query: 189 NQLKNEIEEAKPNGALDEVFKKYCAKSPQLN 281
++ + + + NG ++ K+ + Q++
Sbjct: 216 DEQERLVRKMCDNGLIEMCLDKFACRVVQMS 246
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient
receptor potential subfamilyA-1 protein.
Length = 1206
Score = 30.7 bits (66), Expect = 0.55
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 54 PEDKREQLKQMLTDQCKKYGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIEEAK 221
PE ++ L+ + CK E ++ AA + F+E +K LV+ KNE+ E K
Sbjct: 291 PETLKKILQMEKKNSCKWMDREKELIHF-AAEKGFLEVLKALVEAGGNKNELNEVK 345
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 336 RGHLASVKNSTNQLVDFICYKDGDRIALFIAESG 437
+G++ N T +L+D K+GD +A+ +A +G
Sbjct: 64 KGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 336 RGHLASVKNSTNQLVDFICYKDGDRIALFIAESG 437
+G++ N T +L+D K+GD +A+ +A +G
Sbjct: 64 KGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 336 RGHLASVKNSTNQLVDFICYKDGDRIALFIAESG 437
+G++ N T +L+D K+GD +A+ +A +G
Sbjct: 64 KGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 EDKREQLKQMLTDQCKKYGAEDKV---ATVDAAGRAFVECVKELVDVNQLKNEIEEAK 221
E K E+ L DQ + + A D++ + F+ECVK + V++ +++EA+
Sbjct: 1260 EKKEEKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQ 1317
>Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical
protein ZK1086.2 protein.
Length = 143
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 107 FFALVCEHLF*LFPLIFRELIIL 39
FFA+ C H L PL+F ++ +L
Sbjct: 93 FFAMTCRHALFLVPLLFLQVFVL 115
>Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical
protein T24D3.1 protein.
Length = 174
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 289 SIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLR 432
S HF T +H + T + S QS T P++S + + S+ ++R
Sbjct: 77 SSHFTTFTHFSTPSTSPSTSTQSSTTPSNSDNKKSFQCSNCSVTETIR 124
>AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 289 SIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLR 432
S HF T +H + T + S QS T P++S + + S+ ++R
Sbjct: 77 SSHFTTFTHFSTPSTSPSTSTQSSTTPSNSDNKKSFQCSNCSVTETIR 124
>AC006733-1|AAF60487.1| 610|Caenorhabditis elegans Hypothetical
protein Y32H12A.2 protein.
Length = 610
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +3
Query: 54 PEDK-REQLKQMLTDQCKK------YGAEDKVATVDAAGRAFVECVKELVDVNQLKNEIE 212
PE K E+ Q+LTD K + EDK+AT + R F E +++ + E
Sbjct: 20 PEIKLSEKATQLLTDMPKMDSPEKLFNLEDKIATEMGSDRIFEEFLQDYAFLRNAVEEYL 79
Query: 213 EAKPNGA 233
+ KP +
Sbjct: 80 DGKPTSS 86
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 150 RAFVECVKELV--DVNQLKNEIEEAKPNGALDEVFKKYCAKSPQLNSCINSLLD 305
R V C+++LV + +++N + P G +D KK+ L + +LD
Sbjct: 1103 RQSVSCLRQLVQRESKEVRNHAQVLVPQGIVDTNKKKFALPESGLEGALFGMLD 1156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,700,909
Number of Sequences: 27780
Number of extensions: 175968
Number of successful extensions: 688
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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