Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J16
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   2.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   2.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   2.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   8.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   8.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 126 VATVDAAGRAFVECVKEL 179
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 126 VATVDAAGRAFVECVKEL 179
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 126 VATVDAAGRAFVECVKEL 179
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = +3

Query: 183 DVNQLKNEIEEAKPNGALDEVFKKY 257
           D+N++  ++E+ KP    + + K++
Sbjct: 46  DINEVNFDVEDEKPQRYNECILKQF 70


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = +3

Query: 183 DVNQLKNEIEEAKPNGALDEVFKKY 257
           D+N++  ++E+ KP    + + K++
Sbjct: 46  DINEVNFDVEDEKPQRYNECILKQF 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,331
Number of Sequences: 438
Number of extensions: 2190
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)