BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J13
(212 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein prot... 24 0.56
DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein. 21 5.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 21 5.2
AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein. 21 5.2
AY341213-1|AAR13777.1| 260|Anopheles gambiae SRPN9 protein. 21 5.2
AY341212-1|AAR13776.1| 260|Anopheles gambiae SRPN9 protein. 21 5.2
AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein. 21 5.2
AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein. 21 5.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 21 6.9
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 20 9.1
>AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein
protein.
Length = 90
Score = 24.2 bits (50), Expect = 0.56
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 19 DAEIQRLEEMRNNFSRASQRK 81
D+ + RLE+MR+N + S+R+
Sbjct: 54 DSLLSRLEQMRHNLTGCSERE 74
>DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein.
Length = 447
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 316 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 351
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 21.0 bits (42), Expect = 5.2
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 73 DWPWRSCFSFLQGVEFL-HQFP 11
D P+ F+ +QG++FL + FP
Sbjct: 1767 DGPFAQHFNSIQGIDFLTNLFP 1788
>AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 190 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 225
>AY341213-1|AAR13777.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 190 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 225
>AY341212-1|AAR13776.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 190 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 225
>AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 190 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 225
>AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 LITERDIINEDIKDANDYSISRKRDKVISKRTPGME 203
L E DI++E + + + K K ++T GM+
Sbjct: 190 LAAETDILHEVVNEGISRKVDVKLPKFSIEKTVGMK 225
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 56 TSPGPVRGKAPDSADY*ERHN**RYQGC 139
T+P PV +P S+ Y +R Y GC
Sbjct: 847 TTPVPVSLLSPASSHYSQRSARSPYGGC 874
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 69 QSEERPQTPLITERDIINEDIK 134
Q + +P+T TER+ + D K
Sbjct: 347 QKDSKPKTSSSTERESFDTDPK 368
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,869
Number of Sequences: 2352
Number of extensions: 2622
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 48
effective length of database: 451,083
effective search space used: 9923826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -