Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J13
         (212 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   1.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   2.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   2.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   2.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          20   3.8  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   5.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   5.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          19   6.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   6.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   6.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   8.9  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 81  FPLTGPGEVVSHF 43
           +PL  P EV+SH+
Sbjct: 123 YPLRPPQEVISHY 135


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 DYSISRKRDKVISKRT 191
           +Y + R R+K +SKR+
Sbjct: 62  EYELRRAREKKLSKRS 77


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 45  NEKQLLQGQSEERPQTPLITERDII 119
           N K ++      RP T L+T + ++
Sbjct: 114 NRKSVVFHHDNARPHTSLVTRQKLL 138


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 82  LSSDWPWRSC 53
           L  D PWR+C
Sbjct: 130 LRIDLPWRTC 139


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 82  LSSDWPWRSC 53
           L  D PWR+C
Sbjct: 183 LRIDLPWRTC 192


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 45  NEKQLLQGQSEERPQTPLITERDII 119
           N K ++    + RP T L+T + ++
Sbjct: 115 NRKGVVFHHDDARPHTYLVTRQKLL 139


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 45  NEKQLLQGQSEERPQTPLITERDII 119
           N K ++      RP T L+T + ++
Sbjct: 236 NRKGVVFHHDNARPHTSLVTRQKLL 260


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 181 VNVLQEWKIL 210
           +NV+ EWK L
Sbjct: 35  MNVIHEWKYL 44


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 77  GKAPDSADY*ER 112
           G  PDS DY  R
Sbjct: 92  GSTPDSRDYFSR 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,641
Number of Sequences: 438
Number of extensions: 933
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)